RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 LZTFL1Q9NQ48 299 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 TXLNGQ9NUQ3 528 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 SLC38A7Q9NVC3 462 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 DNAJC28Q9NX36 388 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 BTG4Q9NY30 223 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 NCKIPSDQ9NZQ3 722 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 MARCH2Q9P0N8 246 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 USP36Q9P275 1121 aaKnown RBP3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 GULP1Q9UBP9 304 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 MTRF1LQ9UGC7 380 aaKnown RBP3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 TMEM59LQ9UK28 342 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 VANGL2Q9ULK5 521 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 SNX12Q9UMY4 172 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 PLAGL2Q9UPG8 496 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 GPR45Q9Y5Y3 372 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 DEPDC5O75140 1603 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 PHRF1Q9P1Y6 1649 aaKnown RBP3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 NCAPD2Q15021 1401 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 MED23Q9ULK4 1368 aa3.76□□□□□ -1.81
HMGB3P8-201ENST00000449709 SLIT3O75094 1523 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 ABCC1P33527 1531 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 WDR19Q8NEZ3 1342 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 RAPGEF6Q8TEU7 1601 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 GTPBP10A4D1E9 387 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 GRID2IPA4D2P6 1211 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SYCE1LA8MT33 242 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 C22orf46C9J442 243 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 F8W8V4 182 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 H0Y3Z8 333 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 RNF103O00237 685 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SLC9A3R1O14745 358 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 TPP1O14773 563 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 NDC80O14777 642 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 POLR1CO15160 346 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 ACOX3O15254 700 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SULT1B1O43704 296 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 BUD23O43709 281 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CCNT1O60563 726 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 RNASEH1O60930 286 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 TMCC2O75069 709 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 NDUFS2O75306 463 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 GUCY1B2O75343 617 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 HRGP04196 525 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 GYPCP04921 128 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 ITGB3P05106 788 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 F13BP05160 661 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CEACAM5P06731 702 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 C8BP07358 591 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SLC3A2P08195 630 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CALM1P0DP23 149 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CALM2P0DP24 149 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CALM3P0DP25 149 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 RARGP13631 454 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SLC5A1P13866 664 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 ETS2P15036 469 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 PRKCAP17252 672 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 TCP1P17987 556 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CDH3P22223 829 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 IL10P22301 178 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CMA1P23946 247 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CXCR2P25025 360 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 RPL10P27635 214 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 LTKP29376 864 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 HSPA1LP34931 641 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 PHBP35232 272 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SLC26A3P40879 764 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 TMPOP42166 694 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 NR2C2P49116 596 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 FNTBP49356 437 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 EIF3BP55884 814 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 NAA20P61599 178 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 HERVK_113P62684 666 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 PPP2R2BQ00005 443 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SRSF2Q01130 221 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CEBPZQ03701 1054 aaKnown RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 RUNX1T1Q06455 604 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 GOLGA8FQ08AF8 430 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 MGAT5Q09328 741 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 GOLGA8DPQ0D2H9 430 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 STK4Q13043 487 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CUL1Q13616 776 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 GNA13Q14344 377 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 SQLEQ14534 574 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 NECTIN1Q15223 517 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CYTH1Q15438 398 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 MEA1Q16626 185 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 ZNF829Q3KNS6 432 aaPredicted RBP3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 TMEM95Q3KNT9 176 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 FAM153CQ494X1 144 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 TOR2AQ5JU69 321 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 MAP3K21Q5TCX8 1036 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 METTL11BQ5VVY1 283 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 LILRA6Q6PI73 481 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 KLHDC10Q6PID8 442 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 UGT2A3Q6UWM9 527 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 C4orf22Q6V702 233 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 LRRC74BQ6ZQY2 392 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 MAEAQ7L5Y9 396 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 TMPRSS7Q7RTY8 843 aa3.75□□□□□ -1.81
HMGB3P8-201ENST00000449709 CPLX4Q7Z7G2 160 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms