RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 PLEKHH3Q7Z736 793 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 ZNF567Q8N184 647 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 TEX9Q8N6V9 391 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 NETO2Q8NC67 525 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 ARRDC4Q8NCT1 418 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 SMC1BQ8NDV3 1235 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 NAF1Q96HR8 494 aaKnown RBP17.41■□□□□ 0.38
TOM1-210ENST00000449058 FERMT1Q9BQL6 677 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 PRDM12Q9H4Q4 367 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.41■□□□□ 0.38
TOM1-210ENST00000449058 IGSF9Q9P2J2 1179 aa17.41■□□□□ 0.38
TOM1-210ENST00000449058 PPARGC1AQ9UBK2 798 aaKnown RBP17.41■□□□□ 0.38
TOM1-210ENST00000449058 CLDN5O00501 218 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 PPP1R12AO14974 1030 aaPredicted RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 GLRA3O75311 464 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 GCKP35557 465 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 PDE1CQ14123 709 aaPredicted RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 ACSBG2Q5FVE4 666 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 SYPL2Q5VXT5 272 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 DPY19L2Q6NUT2 758 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 SMG8Q8ND04 991 aaKnown RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 WNT8BQ93098 351 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 MIEF2Q96C03 454 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 STAP1Q9ULZ2 295 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 GNEQ9Y223 722 aaKnown RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 PSAT1Q9Y617 370 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 M0QYT0 321 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 TPP1O14773 563 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 DCLK1O15075 740 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 PTPN1P18031 435 aaKnown RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 LRPAP1P30533 357 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 NDUFV1P49821 464 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 MFSD10Q14728 455 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 KPNB1Q14974 876 aaKnown RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 ZCCHC23Q6ZST2 131 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 CLEC20AQ6ZU45 233 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 RFX8Q6ZV50 586 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 CCDC106Q9BWC9 280 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 CEP41Q9BYV8 373 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 PIGVQ9NUD9 493 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 PIH1D1Q9NWS0 290 aaKnown RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 SYBUQ9NX95 663 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 MARCOQ9UEW3 520 aaPredicted RBP17.4■□□□□ 0.38
TOM1-210ENST00000449058 IPPQ9Y573 584 aa17.4■□□□□ 0.38
TOM1-210ENST00000449058 PLIN3O60664 434 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 FAM163BP0C2L3 166 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 KITP10721 976 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 FGF3P11487 239 aaPredicted RBP17.39■□□□□ 0.38
TOM1-210ENST00000449058 N4BP2L1Q5TBK1 243 aaPredicted RBP17.39■□□□□ 0.38
TOM1-210ENST00000449058 C16orf46Q6P387 395 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 TMPRSS6Q8IU80 811 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 CCNYQ8ND76 341 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 SLC9A7Q96T83 725 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 SIKE1Q9BRV8 207 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 DCDC2Q9UHG0 476 aa17.39■□□□□ 0.38
TOM1-210ENST00000449058 SYNJ2BP-COX16A0A087WUM0 186 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 GABRDO14764 452 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 CREB3O43889 395 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 MAGEC1O60732 1142 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 LUC7L3O95232 432 aaKnown RBP17.39■□□□□ 0.37
TOM1-210ENST00000449058 ITGA2BP08514 1039 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 RAP1GDS1P52306 607 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 DEUP1Q05D60 604 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 TBCCQ15814 346 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 TEDDM1Q5T9Z0 273 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 HFE2Q6ZVN8 426 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 KIRREL3Q8IZU9 778 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 PGBD4Q96DM1 585 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 ZNF778Q96MU6 729 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 LRRC4Q9HBW1 653 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 COX16Q9P0S2 106 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 SEPT10Q9P0V9 454 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 TAGLN3Q9UI15 199 aa17.39■□□□□ 0.37
TOM1-210ENST00000449058 B2RBV5 119 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 HAS3O00219 553 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 EEF2KO00418 725 aaKnown RBP17.38■□□□□ 0.37
TOM1-210ENST00000449058 TREHO43280 583 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 PRKCGP05129 697 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 FYNP06241 537 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 ENO1P06733 434 aaKnown RBP17.38■□□□□ 0.37
TOM1-210ENST00000449058 SERPINA6P08185 405 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 ACAT1P24752 427 aaKnown RBP17.38■□□□□ 0.37
TOM1-210ENST00000449058 TP53INP2Q8IXH6 220 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 SIX6OS1Q8N1H7 587 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 ARHGAP24Q8N264 748 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 RNF169Q8NCN4 708 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 WDR60Q8WVS4 1066 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 STOML1Q9UBI4 398 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 PTGESO14684 152 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 LIN7AO14910 233 aaPredicted RBP17.38■□□□□ 0.37
TOM1-210ENST00000449058 ZNF189O75820 626 aaPredicted RBP17.38■□□□□ 0.37
TOM1-210ENST00000449058 ATP6V1C1P21283 382 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 ADRA1BP35368 520 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 PGM1P36871 562 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 CPA2P48052 419 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 AIF1P55008 147 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 IRX4P78413 519 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 IFRD2Q12894 506 aaPredicted RBP17.38■□□□□ 0.37
TOM1-210ENST00000449058 SEMA3BQ13214 749 aa17.38■□□□□ 0.37
TOM1-210ENST00000449058 NME3Q13232 169 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms