RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 ACADMP11310 421 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 CD6P30203 668 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 COPAP53621 1224 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 PITX1P78337 314 aaPredicted RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 KCNMA1Q12791 1236 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 LMAN2Q12907 356 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 TCP11X2Q5H9J9 407 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 MS4A13Q5J8X5 152 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 CT47A1Q5JQC4 288 aaPredicted RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 EFHC1Q5JVL4 640 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 DAB2IPQ5VWQ8 1189 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 OR6B2Q6IFH4 312 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 METTL3Q86U44 580 aaKnown RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 FAM71AQ8IYT1 594 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 RGL4Q8IZJ4 473 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 LGI2Q8N0V4 545 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 DEFB106AQ8N104 65 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 ZNF557Q8N988 423 aaPredicted RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 FIBINQ8TAL6 211 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 TOE1Q96GM8 510 aaKnown RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 LSM14BQ9BX40 385 aaKnown RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 SYNCQ9H7C4 482 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 ITM2CQ9NQX7 267 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 COX16Q9P0S2 106 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 XPO7Q9UIA9 1087 aaKnown RBP18.35■□□□□ 0.53
DDX56-207ENST00000448192 NFE2L3Q9Y4A8 694 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 CEP83Q9Y592 693 aa18.35■□□□□ 0.53
DDX56-207ENST00000448192 CDX4O14627 284 aaPredicted RBP18.34■□□□□ 0.53
DDX56-207ENST00000448192 IGLV3-25P01717 112 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 ADRB1P08588 477 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 DLDP09622 509 aaKnown RBP18.34■□□□□ 0.53
DDX56-207ENST00000448192 EEF1GP26641 437 aaKnown RBP18.34■□□□□ 0.53
DDX56-207ENST00000448192 HOXD12P35452 270 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 MAPK8P45983 427 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 TPMTP51580 245 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 SNX16P57768 344 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 BPIFB4P59827 614 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 CDK17Q00537 523 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 CDH18Q13634 790 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 DRAP1Q14919 205 aaPredicted RBP18.34■□□□□ 0.53
DDX56-207ENST00000448192 PTPRNQ16849 979 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 DUOXA1Q1HG43 343 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 UAP1L1Q3KQV9 507 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 KLHDC7AQ5VTJ3 777 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 PEAR1Q5VY43 1037 aaPredicted RBP18.34■□□□□ 0.53
DDX56-207ENST00000448192 RAP1GAP2Q684P5 730 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 SMYD5Q6GMV2 418 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 DPY19L2P1Q6NXN4 242 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 SLC23A3Q6PIS1 610 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 C11orf57Q6ZUT1 292 aaPredicted RBP18.34■□□□□ 0.53
DDX56-207ENST00000448192 FAM183BPQ6ZVS7 135 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 CHSY1Q86X52 802 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 CEP76Q8TAP6 659 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 GPT2Q8TD30 523 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 RNF34Q969K3 372 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 BTN2A3PQ96KV6 586 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 GPR174Q9BXC1 333 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 TMEM245Q9H330 911 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.34■□□□□ 0.53
DDX56-207ENST00000448192 DDIT4Q9NX09 232 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 TAB2Q9NYJ8 693 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 USP36Q9P275 1121 aaKnown RBP18.34■□□□□ 0.53
DDX56-207ENST00000448192 SLC12A6Q9UHW9 1150 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 FHOD1Q9Y613 1164 aa18.34■□□□□ 0.53
DDX56-207ENST00000448192 H0Y626 953 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 HSF2BPO75031 334 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 ERBB2P04626 1255 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 GLI1P08151 1106 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 ENGP17813 658 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 TACR2P21452 398 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 CAMK2GQ13555 558 aaPredicted RBP18.33■□□□□ 0.52
DDX56-207ENST00000448192 SYCP2LQ5T4T6 812 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 ATP6V0D2Q8N8Y2 350 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 OR2T3Q8NH03 318 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 FOXJ1Q92949 421 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 ZNF419Q96HQ0 510 aaPredicted RBP18.33■□□□□ 0.52
DDX56-207ENST00000448192 SLC2A13Q96QE2 648 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 VPS16Q9H269 839 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 FSCN3Q9NQT6 498 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 ASNSD1Q9NWL6 643 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 WSB2Q9NYS7 404 aaPredicted RBP18.33■□□□□ 0.52
DDX56-207ENST00000448192 SLC6A14Q9UN76 642 aa18.33■□□□□ 0.52
DDX56-207ENST00000448192 CNOT1A5YKK6 2376 aaKnown RBP18.32■□□□□ 0.52
DDX56-207ENST00000448192 FAM170AA1A519 330 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 KCNU1A8MYU2 1149 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 LUC7L3O95232 432 aaKnown RBP18.32■□□□□ 0.52
DDX56-207ENST00000448192 KCNK5O95279 499 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 SERPINF2P08697 491 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 OXTRP30559 389 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 CSKP41240 450 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 SLC6A3Q01959 620 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 GFPT1Q06210 699 aaPredicted RBP18.32■□□□□ 0.52
DDX56-207ENST00000448192 PTPN20Q4JDL3 420 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 FSCBQ5H9T9 825 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 TAF3Q5VWG9 929 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 MMS22LQ6ZRQ5 1243 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 RABEPKQ7Z6M1 372 aa18.32■□□□□ 0.52
DDX56-207ENST00000448192 FAM124AQ86V42 546 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms