RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 MAP2K2P36507 400 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 BFSP2Q13515 415 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 BTBD8Q5XKL5 378 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 LRRC6Q86X45 466 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 GSDMBQ8TAX9 411 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 FUBP3Q96I24 572 aaKnown RBP eCLIP20.09■□□□□ 0.81
FAM3A-215ENST00000447601 PAIP2Q9BPZ3 127 aaKnown RBP20.09■□□□□ 0.81
FAM3A-215ENST00000447601 OSBPL2Q9H1P3 480 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 ELAC1Q9H777 363 aaKnown RBP20.09■□□□□ 0.81
FAM3A-215ENST00000447601 FGFR1OP2Q9NVK5 253 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 ZNF180Q9UJW8 692 aa20.09■□□□□ 0.81
FAM3A-215ENST00000447601 PRG3Q9Y2Y8 225 aaPredicted RBP20.09■□□□□ 0.81
FAM3A-215ENST00000447601 CENPFP49454 3210 aa20.08■□□□□ 0.81
FAM3A-215ENST00000447601 SYN3O14994 580 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 SNX3O60493 162 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 EPHB2P29323 1055 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 PPIDQ08752 370 aaKnown RBP20.08■□□□□ 0.8
FAM3A-215ENST00000447601 IFRD2Q12894 506 aaPredicted RBP20.08■□□□□ 0.8
FAM3A-215ENST00000447601 NFE2Q16621 373 aaPredicted RBP20.08■□□□□ 0.8
FAM3A-215ENST00000447601 BRMS1LQ5PSV4 323 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 LRRC8BQ6P9F7 803 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 UNC5AQ6ZN44 842 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 ABI1Q8IZP0 508 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 ZNF567Q8N184 647 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 NETO2Q8NC67 525 aa20.08■□□□□ 0.8
FAM3A-215ENST00000447601 TDRD15B5MCY1 1934 aaKnown RBP20.08■□□□□ 0.8
FAM3A-215ENST00000447601 IRAK2O43187 625 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 TADA2AO75478 443 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 LRIG2O94898 1065 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 C1QAP02745 245 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 OR4Q2P0C623 313 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 EIF4EBP2Q13542 120 aaPredicted RBP20.07■□□□□ 0.8
FAM3A-215ENST00000447601 FAM43BQ6ZT52 329 aaPredicted RBP20.07■□□□□ 0.8
FAM3A-215ENST00000447601 PRPF39Q86UA1 669 aaKnown RBP20.07■□□□□ 0.8
FAM3A-215ENST00000447601 CTAGE3PQ8IX95 158 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 PDCD7Q8N8D1 485 aaKnown RBP20.07■□□□□ 0.8
FAM3A-215ENST00000447601 HDAC11Q96DB2 347 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 SMOC2Q9H3U7 446 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 PLAC1Q9HBJ0 212 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 TMEM51Q9NW97 253 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 ARHGEF38Q9NXL2 777 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 ABI2Q9NYB9 513 aaPredicted RBP20.07■□□□□ 0.8
FAM3A-215ENST00000447601 KLHL8Q9P2G9 620 aaPredicted RBP20.07■□□□□ 0.8
FAM3A-215ENST00000447601 PCDHA11Q9Y5I1 949 aa20.07■□□□□ 0.8
FAM3A-215ENST00000447601 TM9SF1O15321 606 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 FKTNO75072 461 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 PSMB4P28070 264 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 HTR7P34969 479 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 GRIA1P42261 906 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 GALNT2Q10471 571 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 LGSNQ5TDP6 509 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 TTC39BQ5VTQ0 682 aaPredicted RBP20.06■□□□□ 0.8
FAM3A-215ENST00000447601 HHATQ5VTY9 493 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 RGS9BPQ6ZS82 235 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 PID1Q7Z2X4 250 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 CCNJLQ8IV13 435 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 SCN4BQ8IWT1 228 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 NPWQ8N729 165 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 PPM1NQ8N819 430 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 STAMBPL1Q96FJ0 436 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 HAPLN3Q96S86 360 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 DNAJB4Q9UDY4 337 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 SDR42E2A6NKP2 422 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 TRIM66O15016 1216 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 KRT37O76014 449 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 OAS1P00973 400 aaKnown RBP20.06■□□□□ 0.8
FAM3A-215ENST00000447601 TAC1P20366 129 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 MAGEA9P43362 315 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 FAAP100Q0VG06 881 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 SEPT7Q16181 437 aaKnown RBP20.06■□□□□ 0.8
FAM3A-215ENST00000447601 PDK4Q16654 411 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 CYS1Q717R9 158 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 TP53INP2Q8IXH6 220 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 MPP5Q8N3R9 675 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 BANPQ8N9N5 519 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 APBB2Q92870 758 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 GRAMD1AQ96CP6 724 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 CEP41Q9BYV8 373 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 USP15Q9Y4E8 981 aaPredicted RBP20.06■□□□□ 0.8
FAM3A-215ENST00000447601 PCDHB7Q9Y5E2 793 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 SNX10Q9Y5X0 201 aa20.06■□□□□ 0.8
FAM3A-215ENST00000447601 F5H423 210 aaPredicted RBP20.05■□□□□ 0.8
FAM3A-215ENST00000447601 KCNK1O00180 336 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 PTPN3P26045 913 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 CCR1P32246 355 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 FOXN2P32314 431 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 GARSP41250 739 aaKnown RBP20.05■□□□□ 0.8
FAM3A-215ENST00000447601 CDK7P50613 346 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 ZKSCAN8Q15776 578 aaPredicted RBP20.05■□□□□ 0.8
FAM3A-215ENST00000447601 VARS2Q5ST30 1063 aaKnown RBP20.05■□□□□ 0.8
FAM3A-215ENST00000447601 C10orf67Q8IYJ2 551 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 C8orf48Q96LL4 319 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 VAT1Q99536 393 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 NAT9Q9BTE0 207 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.05■□□□□ 0.8
FAM3A-215ENST00000447601 TRHDEQ9UKU6 1024 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 FRMPD3Q5JV73 1810 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 DNAH12Q6ZR08 3092 aa20.05■□□□□ 0.8
FAM3A-215ENST00000447601 FAM159BA6NKW6 160 aa20.04■□□□□ 0.8
FAM3A-215ENST00000447601 ENPP3O14638 875 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms