RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MED24O75448 989 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 GRIK1P39086 918 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 CNTN1Q12860 1018 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 MZT2BQ6NZ67 158 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 KIAA0895Q8NCT3 520 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 TMC2Q8TDI7 906 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 OSBPL11Q9BXB4 747 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 SYTL2Q9HCH5 934 aa19.04■□□□□ 0.64
SHANK3-203ENST00000445220 FAM237BA0A1B0GVD1 139 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 MAGEB16A2A368 324 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 SERPIND1P05546 499 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 UQCRBP14927 111 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 FGFR3P22607 806 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 C1QBPQ07021 282 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 TSNQ15631 228 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 ATG14Q6ZNE5 492 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 MCOLN2Q8IZK6 566 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 WDR36Q8NI36 951 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 RIBC2Q9H4K1 309 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 TRDMT1O14717 391 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 PNPLA4P41247 253 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 GALK1P51570 392 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 DRG2P55039 364 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 UBXN6Q9BZV1 441 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 ANAPC2Q9UJX6 822 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 AP4B1Q9Y6B7 739 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 CELF2O95319 508 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 ALDH6A1Q02252 535 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 RNF220Q5VTB9 566 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 IL31Q6EBC2 164 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 EFCAB12Q6NXP0 572 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 ANKRD13AQ8IZ07 590 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 TARS2Q9BW92 718 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 RIOX1Q9H6W3 641 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 RRAGCQ9HB90 399 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 ENTPD7Q9NQZ7 604 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 MRPL39Q9NYK5 338 aaKnown RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 CRNNQ9UBG3 495 aaPredicted RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 LIMD1Q9UGP4 676 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 KCNH4Q9UQ05 1017 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 C2CD2LO14523 706 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 DPYSL4O14531 572 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 MSH3P20585 1137 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 FCHO2Q0JRZ9 810 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 DGCR6Q14129 220 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 FAM228AQ86W67 206 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 PNMA8BQ9ULN7 279 aaPredicted RBP19.03■□□□□ 0.64
SHANK3-203ENST00000445220 GMEB1Q9Y692 573 aa19.03■□□□□ 0.64
SHANK3-203ENST00000445220 GPRC5AQ8NFJ5 357 aa19.02■□□□□ 0.64
SHANK3-203ENST00000445220 HPDLQ96IR7 371 aa19.02■□□□□ 0.64
SHANK3-203ENST00000445220 MST1RQ04912 1400 aa19.02■□□□□ 0.64
SHANK3-203ENST00000445220 FRG1Q14331 258 aaKnown RBP19.02■□□□□ 0.64
SHANK3-203ENST00000445220 LPIN1Q14693 890 aa19.02■□□□□ 0.64
SHANK3-203ENST00000445220 ITFG1Q8TB96 612 aa19.02■□□□□ 0.64
SHANK3-203ENST00000445220 UPF1Q92900 1129 aaKnown RBP eCLIP19.02■□□□□ 0.64
SHANK3-203ENST00000445220 NARS2Q96I59 477 aaKnown RBP19.02■□□□□ 0.64
SHANK3-203ENST00000445220 CCDC167Q9P0B6 97 aa19.02■□□□□ 0.64
SHANK3-203ENST00000445220 A0A096LPK6 155 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 CD3EAPO15446 510 aaKnown RBP19.02■□□□□ 0.63
SHANK3-203ENST00000445220 GARTP22102 1010 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 NAB1Q13506 487 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 GPR63Q9BZJ6 419 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 CLK4Q9HAZ1 481 aaKnown RBP19.02■□□□□ 0.63
SHANK3-203ENST00000445220 PCDHB8Q9UN66 801 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 SNAP91O60641 907 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 ABHD2P08910 425 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 MMP13P45452 471 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 LIN52Q52LA3 116 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 KRCC1Q9NPI7 259 aaPredicted RBP19.02■□□□□ 0.63
SHANK3-203ENST00000445220 POLLQ9UGP5 575 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 PCYOX1Q9UHG3 505 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 KIAA1257Q9ULG3 409 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 ANKRD6Q9Y2G4 727 aa19.02■□□□□ 0.63
SHANK3-203ENST00000445220 CETPP11597 493 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 SPIRE1Q08AE8 756 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 PSMA8Q8TAA3 256 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 CPNE1Q99829 537 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 WDR12Q9GZL7 423 aaKnown RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 A0A0U1RQJ8 604 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 NCF1BA6NI72 391 aaPredicted RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 NCF1CA8MVU1 366 aaPredicted RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 NPTXRO95502 500 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 NCF1P14598 390 aaPredicted RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 TKTP29401 623 aaKnown RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 ANXA11P50995 505 aaKnown RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 NR6A1Q15406 480 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 HIST2H2ACQ16777 129 aaPredicted RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 PGS1Q32NB8 556 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 GPR107Q5VW38 600 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 HIST2H2AA3Q6FI13 130 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 ULK2Q8IYT8 1036 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 MAGEE2Q8TD90 523 aaPredicted RBP19.01■□□□□ 0.63
SHANK3-203ENST00000445220 FAM172AQ8WUF8 416 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 CBWD1Q9BRT8 395 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 VANGL2Q9ULK5 521 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 DPPA5A6NC42 116 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 CYP2C9P11712 490 aa19.01■□□□□ 0.63
SHANK3-203ENST00000445220 IL12AP29459 219 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms