RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 TEX44Q53QW1 395 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 C2CD6Q53TS8 623 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CEP85LQ5SZL2 805 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FAM171A1Q5VUB5 890 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 OTUD1Q5VV17 481 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SYPL2Q5VXT5 272 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 IZUMO3Q5VZ72 239 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 STEAP4Q687X5 459 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RNF43Q68DV7 783 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KCTD11Q693B1 232 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 NCBP2-AS2Q69YL0 99 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TXNRD3NBQ6F5E7 133 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 NAPEPLDQ6IQ20 393 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SCYL2Q6P3W7 929 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LRRC8BQ6P9F7 803 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DARS2Q6PI48 645 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ADGRD1Q6QNK2 874 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KCNT2Q6UVM3 1135 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LRRC31Q6UY01 552 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LEKR1Q6ZMV7 388 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TIFABQ6ZNK6 161 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ARHGEF18Q6ZSZ5 1173 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC149Q6ZUS6 474 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 B4GALNT4Q76KP1 1039 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CHST9Q7L1S5 443 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TMEM135Q86UB9 458 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LRRTM3Q86VH5 581 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SLC26A11Q86WA9 606 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LRRC6Q86X45 466 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DDX42Q86XP3 938 aaKnown RBP eCLIP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DNAAF5Q86Y56 855 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF280BQ86YH2 543 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RFX6Q8HWS3 928 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FAM217AQ8IXS0 508 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PALM2Q8IXS6 379 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PLPP6Q8IY26 295 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KIRREL3Q8IZU9 778 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SLC39A11Q8N1S5 342 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 BBS5Q8N3I7 341 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TEX26Q8N6G2 289 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RTL3Q8N8U3 475 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 GBP7Q8N8V2 638 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 OR10T2Q8NGX3 314 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RAB3IL1Q8TBN0 382 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF398Q8TD17 642 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DQX1Q8TE96 717 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PYROXD1Q8WU10 500 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 UBLCP1Q8WVY7 318 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 STON2Q8WXE9 905 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CPT1BQ92523 772 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MAML1Q92585 1016 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 HSPH1Q92598 858 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CDKL2Q92772 493 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LPPQ93052 612 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PSMG2Q969U7 264 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TBC1D31Q96DN5 1066 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC97Q96F63 343 aaPredicted RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CABS1Q96KC9 395 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TEKT5Q96M29 485 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CCDC114Q96M63 670 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF558Q96NG5 402 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FCRL5Q96RD9 977 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RANBP9Q96S59 729 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PPP1R16BQ96T49 567 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 KCNK16Q96T55 309 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 IL12RB2Q99665 862 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 HERPUD2Q9BSE4 406 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 HERC2P3Q9BVR0 1158 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TMEM106CQ9BVX2 250 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 HEMGNQ9BXL5 484 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CAPS2Q9BXY5 557 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PRKD2Q9BZL6 878 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ZYG11BQ9C0D3 744 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 IL22Q9GZX6 179 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TKTL2Q9H0I9 626 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LMAN2LQ9H0V9 348 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MAGEH1Q9H213 219 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 VPS11Q9H270 941 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CXCL16Q9H2A7 254 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 EPC1Q9H2F5 836 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 EPB41L4BQ9H329 900 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 CDC42EP4Q9H3Q1 356 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SEMA4AQ9H3S1 761 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PLEKHA4Q9H4M7 779 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DHX35Q9H5Z1 703 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 FAM204AQ9H8W3 233 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LRRC40Q9H9A6 602 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 LRRC4CQ9HCJ2 640 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 ENTPD7Q9NQZ7 604 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PLSCR2Q9NRY7 297 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 PIGVQ9NUD9 493 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 RYDENQ9NUL5 291 aaKnown RBP2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MRGBPQ9NV56 204 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TMEM39AQ9NV64 488 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 TMEM248Q9NWD8 314 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 DDIT4Q9NX09 232 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 OSER1Q9NX31 292 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 MOCS1Q9NZB8 636 aa2.91□□□□□ -1.94
LINC00393-201ENST00000443621 SPG21Q9NZD8 308 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms