RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PARP6Q2NL67 630 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 SPANXN3Q5MJ09 141 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 UGT3A1Q6NUS8 523 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 YAF2Q8IY57 180 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 OR52K1Q8NGK4 314 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 LENG9Q96B70 501 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 OXNAD1Q96HP4 312 aaPredicted RBP22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 MYLK2Q9H1R3 596 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 SLCO1B7G3V0H7 640 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 TSPAN3O60637 253 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 ATP6V1G2O95670 118 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 C4BPAP04003 597 aaKnown RBP22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 YWHAQP27348 245 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 SYTL2Q9HCH5 934 aa22.95■■□□□ 1.26
CTDSPL-206ENST00000443503 URODP06132 367 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 BTKQ06187 659 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 NBPF20Q3BBV1 942 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 DEFB107AQ8IZN7 70 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 CPXM1Q96SM3 734 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 MTIF3Q9H2K0 278 aaKnown RBP22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 RNPEPQ9H4A4 650 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 CXorf56Q9H5V9 222 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 DTNAQ9Y4J8 743 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 FKBP9O95302 570 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 FKBP9P1Q75LS8 142 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 CLPBQ9H078 707 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 NALCNQ8IZF0 1738 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 ENO4A6NNW6 628 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 ACADSP16219 412 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 CDK16Q00536 496 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 AASDHQ4L235 1098 aaPredicted RBP22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 RNF168Q8IYW5 571 aaPredicted RBP22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 SHISA4Q96DD7 197 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 VAT1Q99536 393 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 XPNPEP1Q9NQW7 623 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 PHGDHO43175 533 aaKnown RBP22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 GALNTL6Q49A17 601 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 PLEKHA7Q6IQ23 1121 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 NUDT18Q6ZVK8 323 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 CPNE1Q99829 537 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 TMEM106CQ9BVX2 250 aa22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 NXF3Q9H4D5 531 aaKnown RBP22.94■■□□□ 1.26
CTDSPL-206ENST00000443503 TBKBP1A7MCY6 615 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 B4GALT4O60513 344 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 HSPA1AP0DMV8 641 aaKnown RBP22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 HSPA1BP0DMV9 641 aaKnown RBP22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 ALADP13716 330 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 GOT1P17174 413 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 ECSITQ9BQ95 431 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 THUMPD3Q9BV44 507 aaKnown RBP22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 NMRK2Q9NPI5 230 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 SOX13Q9UN79 622 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 MPOP05164 745 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 AGKQ53H12 422 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 NETO2Q8NC67 525 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 COL1A1P02452 1464 aaPredicted RBP22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 TRIM16O95361 564 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 FECHP22830 423 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 PRKAA1Q13131 559 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 TMPRSS6Q8IU80 811 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 NAF1Q96HR8 494 aaKnown RBP22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 LGMNQ99538 433 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 C17orf80Q9BSJ5 609 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 PRKD2Q9BZL6 878 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 WRAP73Q9P2S5 460 aaPredicted RBP22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 XRN1Q8IZH2 1706 aaKnown RBP22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 GRM5P41594 1212 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 PPP3CCP48454 512 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 FUT11Q495W5 492 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 FUKQ8N0W3 1084 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 ACTL7BQ9Y614 415 aa22.93■■□□□ 1.26
CTDSPL-206ENST00000443503 ABHD2P08910 425 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 ATP6V1B1P15313 513 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 PLK1P53350 603 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 LRRC74AQ0VAA2 488 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 CCDC153Q494R4 210 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 TAGAPQ8N103 731 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 DAW1Q8N136 415 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 LPCAT1Q8NF37 534 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 LPPQ93052 612 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 CEP19Q96LK0 163 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 B3GNT5Q9BYG0 378 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 ATP13A1Q9HD20 1204 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 SLCO1B3Q9NPD5 702 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 SLC15A5A6NIM6 579 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 NR2E1Q9Y466 385 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 ZNF670Q9BS34 389 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 ACSS3Q9H6R3 686 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 COG4Q9H9E3 785 aa22.92■■□□□ 1.26
CTDSPL-206ENST00000443503 SNED1Q8TER0 1413 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 CLDN5O00501 218 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 ITGALP20701 1170 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 PTK2BQ14289 1009 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 LRRC52Q8N7C0 313 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 CATSPER2Q96P56 530 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 NEUROG2Q9H2A3 272 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 MYO1GB0I1T2 1018 aa22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 PLOD1Q02809 727 aaPredicted RBP22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 PSTKQ8IV42 348 aaKnown RBP22.91■■□□□ 1.26
CTDSPL-206ENST00000443503 NMRAL1Q9HBL8 299 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms