RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 LATS1O95835 1130 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 NR3C1P04150 777 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 CD58P19256 250 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 ARID5BQ14865 1188 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 MPP7Q5T2T1 576 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 ADGRF1Q5T601 910 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 RSRC2Q7L4I2 434 aaKnown RBP15.01□□□□□ -0.01
HMGN1-208ENST00000443046 FMNL3Q8IVF7 1028 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 WFDC5Q8TCV5 224 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 TAS1R2Q8TE23 839 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 BAP1Q92560 729 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 FGF11Q92914 225 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 TMA16Q96EY4 203 aaKnown RBP15.01□□□□□ -0.01
HMGN1-208ENST00000443046 SERGEFQ9UGK8 458 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 ADAMTS1Q9UHI8 967 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 HBS1LQ9Y450 684 aaKnown RBP15.01□□□□□ -0.01
HMGN1-208ENST00000443046 AK5Q9Y6K8 562 aa15.01□□□□□ -0.01
HMGN1-208ENST00000443046 WNT9AO14904 365 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 YEATS4O95619 227 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 ZBED1O96006 694 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 ATP5BP06576 529 aaKnown RBP15□□□□□ -0.01
HMGN1-208ENST00000443046 ITGAVP06756 1048 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 SLFN14P0C7P3 912 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 ABCB4P21439 1286 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 EPHA8P29322 1005 aaPredicted RBP15□□□□□ -0.01
HMGN1-208ENST00000443046 CD70P32970 193 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 RXRGP48443 463 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 HARS2P49590 506 aaKnown RBP15□□□□□ -0.01
HMGN1-208ENST00000443046 SGSHP51688 502 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 TKTL1P51854 596 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 TLE3Q04726 772 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 PPP3CAQ08209 521 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 ILKQ13418 452 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 SFMBT2Q5VUG0 894 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 ARHGAP17Q68EM7 881 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 NCEH1Q6PIU2 408 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 KANSL1Q7Z3B3 1105 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 EID2Q8N6I1 236 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 ANKRD52Q8NB46 1076 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 SLC4A11Q8NBS3 891 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 TTC17Q96AE7 1141 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 SKA1Q96BD8 255 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 FAXDC2Q96IV6 333 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 IRX2Q9BZI1 471 aaPredicted RBP15□□□□□ -0.01
HMGN1-208ENST00000443046 MTG2Q9H4K7 406 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 OLA1Q9NTK5 396 aaKnown RBP15□□□□□ -0.01
HMGN1-208ENST00000443046 FBXL12Q9NXK8 326 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 NCKAP1Q9Y2A7 1128 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 HECTD1Q9ULT8 2610 aa15□□□□□ -0.01
HMGN1-208ENST00000443046 CAPN9O14815 690 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 BRINP1O60477 761 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 CD38P28907 300 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 GCLMP48507 274 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 CCR5P51681 352 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 VAMP7P51809 220 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 ENPEPQ07075 957 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 HNRNPA1L2Q32P51 320 aaKnown RBP14.99□□□□□ -0.01
HMGN1-208ENST00000443046 ERICH1Q86X53 443 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 OR2T34Q8NGX1 318 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 NDRG1Q92597 394 aaKnown RBP14.99□□□□□ -0.01
HMGN1-208ENST00000443046 TMEM176AQ96HP8 235 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 INTS4Q96HW7 963 aaKnown RBP14.99□□□□□ -0.01
HMGN1-208ENST00000443046 MRGPRX3Q96LB0 322 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 HEXIM2Q96MH2 286 aaKnown RBP14.99□□□□□ -0.01
HMGN1-208ENST00000443046 IMPG2Q9BZV3 1241 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 DNAI2Q9GZS0 605 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 NEUROG2Q9H2A3 272 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 ERVMER34-1Q9H9K5 563 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 SFMBT1Q9UHJ3 866 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 FZD4Q9ULV1 537 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 TRAF3IP3Q9Y228 551 aa14.99□□□□□ -0.01
HMGN1-208ENST00000443046 PIEZO2Q9H5I5 2752 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 CAPN8A6NHC0 703 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 CYSRT1A8MQ03 144 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 TULP2O00295 520 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 SIN3BO75182 1162 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 POLR2EP19388 210 aaKnown RBP14.98□□□□□ -0.01
HMGN1-208ENST00000443046 AFMP43652 599 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 RAD23BP54727 409 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 NXPH1P58417 271 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 CFHR1Q03591 330 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 BNIP3Q12983 259 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 C9orf64Q5T6V5 341 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 PIK3R6Q5UE93 754 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 GRAMD1CQ8IYS0 662 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 TTC39CQ8N584 583 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 DCBLD1Q8N8Z6 715 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 KDM1BQ8NB78 822 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 WBP1Q96G27 269 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 ULBP1Q9BZM6 244 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 GDF3Q9NR23 364 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 INTS6Q9UL03 887 aaKnown RBP14.98□□□□□ -0.01
HMGN1-208ENST00000443046 FRMD4BQ9Y2L6 1034 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 SPTA1P02549 2419 aa14.98□□□□□ -0.01
HMGN1-208ENST00000443046 A0A1W2PP55 124 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 FAM47DPA6NHR8 397 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 LRRC72A6NJI9 287 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 ERVH48-1M5A8F1 160 aa14.97□□□□□ -0.01
HMGN1-208ENST00000443046 TLR4O00206 839 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms