RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 HSF2BPO75031 334 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 CYP11B1P15538 503 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 IRX4P78413 519 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 RPL6Q02878 288 aaKnown RBP19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 RAPGEF1Q13905 1077 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 KRT31Q15323 416 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 DCAF6Q58WW2 860 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 LYSMD4Q5XG99 296 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 MBLAC2Q68D91 279 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 TMPRSS6Q8IU80 811 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 SYT12Q8IV01 421 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 SLC41A1Q8IVJ1 513 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 ZNF557Q8N988 423 aaPredicted RBP19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 ZNF397Q8NF99 534 aaPredicted RBP19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 BTN2A3PQ96KV6 586 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 NOX5Q96PH1 765 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 STK33Q9BYT3 514 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 GANQ9H2C0 597 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 ITM2CQ9NQX7 267 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 INTS6Q9UL03 887 aaKnown RBP19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 DOCK4Q8N1I0 1966 aa19.61■□□□□ 0.73
HMGB3P22-201ENST00000442010 PCNX2A6NKB5 2137 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 KHNYNO15037 678 aaKnown RBP19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 MOCS2O96007 188 aaPredicted RBP19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 APOEP02649 317 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 EPHX1P07099 455 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 HLA-EP13747 358 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 TACR2P21452 398 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 ITPKAP23677 461 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 SLC6A3Q01959 620 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 ZNF33AQ06730 810 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 LMAN2Q12907 356 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 CAMK2GQ13555 558 aaPredicted RBP19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 OR6B2Q6IFH4 312 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 KIAA1324Q6UXG2 1013 aaKnown RBP19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 SERPINA13PQ6UXR4 307 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 SLC26A9Q7LBE3 791 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 MFN1Q8IWA4 741 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 DEFB119Q8N690 84 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 TTC17Q96AE7 1141 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 MYO19Q96H55 970 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 ZNF419Q96HQ0 510 aaPredicted RBP19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 PRMT1Q99873 361 aaKnown RBP19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 EDEM2Q9BV94 578 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 VPS16Q9H269 839 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 FANCLQ9NW38 375 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 STIM2Q9P246 746 aa19.6■□□□□ 0.73
HMGB3P22-201ENST00000442010 F8VZ95 297 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 PES1O00541 588 aaKnown RBP19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 CDX4O14627 284 aaPredicted RBP19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 SYNCRIPO60506 623 aaKnown RBP19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 GRAP2O75791 330 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 IGLV3-19P01714 112 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 DLDP09622 509 aaKnown RBP19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 HOXD12P35452 270 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 DPP6P42658 865 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 GABRB2P47870 512 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 CDK17Q00537 523 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 FSCBQ5H9T9 825 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 OTUD1Q5VV17 481 aaPredicted RBP19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 RAP1GAP2Q684P5 730 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 NOP9Q86U38 636 aaKnown RBP19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 CFAP52Q8N1V2 620 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 ADAM33Q9BZ11 813 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 WSB2Q9NYS7 404 aaPredicted RBP19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 PLA2G4CQ9UP65 541 aa19.59■□□□□ 0.73
HMGB3P22-201ENST00000442010 ATXN2Q99700 1313 aaKnown RBP19.58■□□□□ 0.73
HMGB3P22-201ENST00000442010 GOLGA6L22H0YM25 854 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 DAB1O75553 588 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 LUC7L3O95232 432 aaKnown RBP19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 CD6P30203 668 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 KLK7P49862 253 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 TPMTP51580 245 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 SNX16P57768 344 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 ARID5AQ03989 594 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 FNDC3BQ53EP0 1204 aaKnown RBP19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 TRIM61Q5EBN2 209 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 IL31Q6EBC2 164 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 SLC23A3Q6PIS1 610 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 ZDHHC17Q8IUH5 632 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 LGI2Q8N0V4 545 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 ZNF366Q8N895 744 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 ATP6V0D2Q8N8Y2 350 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 TMEM35BQ8NCS4 154 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 OR2T3Q8NH03 318 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 SIPA1Q96FS4 1042 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 HSD3B7Q9H2F3 369 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 FAM204AQ9H8W3 233 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 ANO10Q9NW15 660 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 DDIT4Q9NX09 232 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 CEP83Q9Y592 693 aa19.58■□□□□ 0.72
HMGB3P22-201ENST00000442010 TYW5A2RUC4 315 aaKnown RBP19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 EPHB6O15197 1021 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 ATP5BP06576 529 aaKnown RBP19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 POLR2EP19388 210 aaKnown RBP19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 CCR1P32246 355 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 NOS2P35228 1153 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 JAM2P57087 298 aa19.57■□□□□ 0.72
HMGB3P22-201ENST00000442010 NCAPHQ15003 741 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms