RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 P2RY11Q96G91 374 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 SPATA17Q96L03 361 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 PPP1R2P1Q96PQ5 205 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 PAFAH2Q99487 392 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 LGMNQ99538 433 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 FAM107BQ9H098 131 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 PRDM12Q9H4Q4 367 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 TMPRSS4Q9NRS4 437 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 CLIC5Q9NZA1 410 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 KLHL8Q9P2G9 620 aaPredicted RBP13.56□□□□□ -0.24
CPSF4-206ENST00000441580 OR12D3Q9UGF7 316 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 RABGEF1Q9UJ41 708 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 TRHDEQ9UKU6 1024 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 IKBKGQ9Y6K9 419 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 IQANK1A0A1B0GTG1 560 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 A0A1W2PQH9 124 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 FAM92AA1XBS5 289 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 MTMR11A4FU01 709 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 FAM72CH0Y354 149 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 PRPF4O43172 522 aaKnown RBP eCLIP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 METTL18O95568 372 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 APOEP02649 317 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 KRT15P19012 456 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 GBP2P32456 591 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 GARSP41250 739 aaKnown RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 MSH2P43246 934 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 GATMP50440 423 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 GPR17Q13304 367 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 MTFR1Q15390 333 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 HP1BP3Q5SSJ5 553 aaPredicted RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 FAM72AQ5TYM5 149 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 MANEALQ5VSG8 457 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 FAM72DQ6L9T8 149 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 SLC39A5Q6ZMH5 540 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 C3orf62Q6ZUJ4 267 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 ZNF534Q76KX8 674 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 SCD5Q86SK9 330 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 FAM72BQ86X60 149 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 CEP57Q86XR8 500 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 COLGALT1Q8NBJ5 622 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 ZNF473Q8WTR7 871 aaKnown RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 MAML1Q92585 1016 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 CHMP6Q96FZ7 201 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 SMC6Q96SB8 1091 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 CDK5RAP1Q96SZ6 601 aaKnown RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 MAGEB5Q9BZ81 275 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 CRISPLD2Q9H0B8 497 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 GBA3Q9H227 469 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 PPANQ9NQ55 473 aaKnown RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 ANLNQ9NQW6 1124 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 DONSONQ9NYP3 566 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 IL37Q9NZH6 218 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 ZC3H7BQ9UGR2 993 aaKnown RBP13.55□□□□□ -0.24
CPSF4-206ENST00000441580 TBK1Q9UHD2 729 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 NEU3Q9UQ49 428 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 TLR6Q9Y2C9 796 aa13.55□□□□□ -0.24
CPSF4-206ENST00000441580 ZNF638Q14966 1978 aaKnown RBP13.54□□□□□ -0.24
CPSF4-206ENST00000441580 TCRBV9S1A1TA0A576 114 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 FAM47DPA6NHR8 397 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 I6L893 689 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-206ENST00000441580 EBAG9O00559 213 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 TRDMT1O14717 391 aaKnown RBP13.54□□□□□ -0.24
CPSF4-206ENST00000441580 GALTP07902 379 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 INHBAP08476 426 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 PTPN3P26045 913 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 YWHAQP27348 245 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 SSTR1P30872 391 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 CCT5P48643 541 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 WASHC5Q12768 1159 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 NAB1Q13506 487 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 TRIM60Q495X7 471 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 LRRC8BQ6P9F7 803 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 ADGRD1Q6QNK2 874 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 CAND1Q86VP6 1230 aaKnown RBP13.54□□□□□ -0.24
CPSF4-206ENST00000441580 ATPAF2Q8N5M1 289 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 NPWQ8N729 165 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 GSDMBQ8TAX9 411 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 CASP10Q92851 521 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 FBXO32Q969P5 355 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 ALKBH8Q96BT7 664 aaKnown RBP13.54□□□□□ -0.24
CPSF4-206ENST00000441580 CFAP36Q96G28 342 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 SCLYQ96I15 445 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 GPR62Q9BZJ7 368 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 TRABDQ9H4I3 376 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 TLR8Q9NR97 1041 aaKnown RBP13.54□□□□□ -0.24
CPSF4-206ENST00000441580 SEPT10Q9P0V9 454 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 GMIPQ9P107 970 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 TBX21Q9UL17 535 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 TTLL3Q9Y4R7 772 aa13.54□□□□□ -0.24
CPSF4-206ENST00000441580 COL4A6Q14031 1691 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 AP3B1O00203 1094 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 MSI1O43347 362 aaKnown RBP13.53□□□□□ -0.24
CPSF4-206ENST00000441580 TBC1D4O60343 1298 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 PAGE1O75459 146 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 HAPLN1P10915 354 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-206ENST00000441580 PRKCHP24723 683 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms