RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 DSELQ8IZU8 1212 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF781Q8N8C0 355 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 FAM110BQ8TC76 370 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TAMM41Q96BW9 452 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 VPS50Q96JG6 964 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SPACA7Q96KW9 195 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SETDB2Q96T68 719 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 NEURL2Q9BR09 285 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CENPOQ9BU64 300 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CEP41Q9BYV8 373 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF696Q9H7X3 374 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TMEM206Q9H813 350 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 COG4Q9H9E3 785 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TMEM8AQ9HCN3 771 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 POU2F3Q9UKI9 436 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 PCDHB2Q9Y5E7 798 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MYH11P35749 1972 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF839A8K0R7 811 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TPP1O14773 563 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 NRP1O14786 923 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 NOL3O60936 208 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 STAM2O75886 525 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 H6PDO95479 791 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MT-ND1P03886 318 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 HDCP19113 662 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 OSBPP22059 807 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 IL1R2P27930 398 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 PPARGP37231 505 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 ARL1P40616 181 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CDKN2BP42772 138 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 TUFMP49411 452 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 PFKPQ01813 784 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 NFIAQ12857 509 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SLC10A2Q12908 348 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 DNASE1L3Q13609 305 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CEACAM7Q14002 265 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SPIDRQ14159 915 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SLC15A4Q8N697 577 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 PSD4Q8NDX1 1056 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MAPK15Q8TD08 544 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 PDCD6IPQ8WUM4 868 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 UPF1Q92900 1129 aaKnown RBP eCLIP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 GFM2Q969S9 779 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 DHRS1Q96LJ7 313 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 MTG1Q9BT17 334 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SSU72Q9NP77 194 aaKnown RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 KMT5AQ9NQR1 393 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 PARVAQ9NVD7 372 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 C6orf203Q9P0P8 240 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 BCAP29Q9UHQ4 241 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 RAB26Q9ULW5 256 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 AP4E1Q9UPM8 1137 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 FARP1Q9Y4F1 1045 aaPredicted RBP7.73□□□□□ -1.17
HDAC9-214ENST00000441542 FADS3Q9Y5Q0 445 aa7.73□□□□□ -1.17
HDAC9-214ENST00000441542 SPATA31A5Q5VU36 1347 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 SPATA31A7Q8IWB4 1347 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 THSD7AQ9UPZ6 1657 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 A0A1W2PQ67 120 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 PSMD11O00231 422 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 BBOX1O75936 387 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ESRRBO95718 433 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 APBA3O96018 575 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ARRB2P32121 409 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 IREB2P48200 963 aaKnown RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 NOMO3P69849 1222 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 XIAPP98170 497 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF252P-AS1Q0IIN9 211 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 PLCL1Q15111 1095 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 RAB6CQ53S08 254 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 PGM2L1Q6PCE3 622 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 JOSD2Q8TAC2 188 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 SERPINI1Q99574 410 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 MXRA8Q9BRK3 442 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 RAB6CQ9H0N0 254 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 CXorf21Q9HAI6 301 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 GID8Q9NWU2 228 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 SIRPGQ9P1W8 387 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 WARS2Q9UGM6 360 aaKnown RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ACAD8Q9UKU7 415 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 FAM32AQ9Y421 112 aaKnown RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 PCDHAC2Q9Y5I4 1007 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 RNF103-CHMP3A0A140T963 221 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 CFAP99D6REC4 459 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 RALBP11234 206 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ZNF23P17027 643 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ENPP1P22413 925 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 PIK3R1P27986 724 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ECE1P42892 770 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 QARSP47897 775 aaKnown RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 GLRBP48167 497 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 BMXP51813 675 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 NME5P56597 212 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 WNT7BP56706 349 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 YWHAZP63104 245 aaKnown RBP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 ROR1Q01973 937 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 BFSP2Q13515 415 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 APOFQ13790 326 aa7.72□□□□□ -1.17
HDAC9-214ENST00000441542 SF3B4Q15427 424 aaKnown RBP eCLIP7.72□□□□□ -1.17
HDAC9-214ENST00000441542 RGS21Q2M5E4 152 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms