RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ZNF483Q8TF39 744 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CCDC127Q96BQ5 260 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 CABS1Q96KC9 395 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 ARPC5LQ9BPX5 153 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 NUP58Q9BVL2 599 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 BBS2Q9BXC9 721 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 FGFBP2Q9BYJ0 223 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 SMPD4Q9NXE4 827 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 KLHL42Q9P2K6 505 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 NXF1Q9UBU9 619 aaKnown RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 STRIP2Q9ULQ0 834 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 TRAF3IP3Q9Y228 551 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 NME7Q9Y5B8 376 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 USP3Q9Y6I4 520 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 COL5A1P20908 1838 aaPredicted RBP6.28□□□□□ -1.4
PTPRR-204ENST00000440835 VPS13AQ96RL7 3174 aa6.28□□□□□ -1.4
PTPRR-204ENST00000440835 PI4KAP42356 2102 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 CFAP69A5D8W1 941 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 GIPC1O14908 333 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 YKT6O15498 198 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 FLRT2O43155 660 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 HCRTO43612 131 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 SHOX2O60902 331 aaPredicted RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 FGFR1OPO95684 399 aaKnown RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 CAPNS1P04632 268 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 ACO1P21399 889 aaKnown RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 ITPKAP23677 461 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 PTGER3P43115 390 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 YWHAEP62258 255 aaKnown RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 SIM1P81133 766 aaPredicted RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 ACAP1Q15027 740 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 TEAD4Q15561 434 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 TMEM25Q86YD3 366 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 NAXDQ8IW45 347 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 CHPFQ8IZ52 775 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 KIRREL3Q8IZU9 778 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 GALNT15Q8N3T1 639 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 KDM1BQ8NB78 822 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 SPATA20Q8TB22 786 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 ENOX1Q8TC92 643 aaKnown RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 SMOQ99835 787 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 DPEP3Q9H4B8 488 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 CCSER2Q9H7U1 834 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 KIAA1257Q9ULG3 409 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 HBS1LQ9Y450 684 aaKnown RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 ABCA7Q8IZY2 2146 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 PATE3B3GLJ2 98 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 HHLA1C9JL84 531 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 TAF4O00268 1085 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 PSMA7O14818 248 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 SKAP2O75563 359 aaPredicted RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 NDUFV2P19404 249 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 KIF11P52732 1056 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 CACNA2D1P54289 1103 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 NCAPHQ15003 741 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 TRIP6Q15654 476 aaKnown RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 FILIP1LQ4L180 1135 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 WLSQ5T9L3 541 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 CCNI2Q6ZMN8 369 aaPredicted RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 ANKS1BQ7Z6G8 1248 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 TTC30AQ86WT1 665 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 FAM114A1Q8IWE2 563 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 GRAMD1CQ8IYS0 662 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 AZIN2Q96A70 460 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 SCYL1Q96KG9 808 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 MRGPRX1Q96LB2 322 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 DUSP16Q9BY84 665 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 SMYD3Q9H7B4 428 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 TMEM74BQ9NUR3 256 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 TMEM30AQ9NV96 361 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 WSB2Q9NYS7 404 aaPredicted RBP6.27□□□□□ -1.41
PTPRR-204ENST00000440835 STOML2Q9UJZ1 356 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 INVSQ9Y283 1065 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 MYOFQ9NZM1 2061 aa6.27□□□□□ -1.41
PTPRR-204ENST00000440835 NEDD8-MDP1E9PL57 170 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 CLDN5O00501 218 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 EBAG9O00559 213 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 SYNCRIPO60506 623 aaKnown RBP6.26□□□□□ -1.41
PTPRR-204ENST00000440835 VNN1O95497 513 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 SERPINC1P01008 464 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 C1SP09871 688 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 RHOXF2BP0C7M4 288 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 RARGP13631 454 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 ATP1A3P13637 1013 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 KRT13P13646 458 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 HOXC13P31276 330 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 NUDT1P36639 197 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 MATKP42679 507 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 MAPK8P45983 427 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 NDST1P52848 882 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 CRYMQ14894 314 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 CCDC142Q17RM4 750 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 PLEKHG6Q3KR16 790 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 MPP7Q5T2T1 576 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 EGFLAMQ63HQ2 1017 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 ARHGAP17Q68EM7 881 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 CLEC20AQ6ZU45 233 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 TOGARAM2Q6ZUX3 1019 aa6.26□□□□□ -1.41
PTPRR-204ENST00000440835 PROSER1Q86XN7 944 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms