RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 C3orf62Q6ZUJ4 267 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 KLC2Q9H0B6 622 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 UBN1Q9NPG3 1134 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 GRID1Q9ULK0 1009 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 MFHAS1Q9Y4C4 1052 aa14.59□□□□□ -0.07
LIMD1-202ENST00000440097 RASSF2P50749 326 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 KHDC1Q4VXA5 237 aaKnown RBP14.58□□□□□ -0.07
LIMD1-202ENST00000440097 TAF1BQ53T94 588 aaPredicted RBP14.58□□□□□ -0.07
LIMD1-202ENST00000440097 HEATR6Q6AI08 1181 aaKnown RBP14.58□□□□□ -0.07
LIMD1-202ENST00000440097 OR52E8Q6IFG1 317 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 KCNT2Q6UVM3 1135 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 CDKL3Q8IVW4 592 aaPredicted RBP14.58□□□□□ -0.07
LIMD1-202ENST00000440097 ATP11CQ8NB49 1132 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 PHC3Q8NDX5 983 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 LRRC8CQ8TDW0 803 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 DCLRE1BQ9H816 532 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 PIGVQ9NUD9 493 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 ETNK2Q9NVF9 386 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 DDIT4Q9NX09 232 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 MTMR10Q9NXD2 777 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 EURLQ9NYK6 297 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 NR2E3Q9Y5X4 410 aa14.58□□□□□ -0.07
LIMD1-202ENST00000440097 CFAP69A5D8W1 941 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 AVILO75366 819 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 FBXO21O94952 628 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 INHAP05111 366 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 ABHD2P08910 425 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 DAOAP59103 153 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 DSC3Q14574 896 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 IRGCQ6NXR0 463 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 THEM5Q8N1Q8 247 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 CCNYQ8ND76 341 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 ZMIZ2Q8NF64 920 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 C10orf82Q8WW14 230 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 MAML1Q92585 1016 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 VCXQ9H320 206 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 USP29Q9HBJ7 922 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 CREBZFQ9NS37 354 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 FZD10Q9ULW2 581 aa14.58□□□□□ -0.08
LIMD1-202ENST00000440097 EDF1O60869 148 aaKnown RBP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 TSPY1Q01534 308 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 SLC10A2Q12908 348 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 CCDC6Q16204 474 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 RNF139Q8WU17 664 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 ZFAND2BQ8WV99 257 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 RSPH1Q8WYR4 309 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 RNF34Q969K3 372 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 TMEM209Q96SK2 561 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 NPY6RQ99463 290 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 CNGB3Q9NQW8 809 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 PTCH2Q9Y6C5 1203 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 LMNAP02545 664 aaKnown RBP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 LTFP02788 710 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 PTPN4P29074 926 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 VHLP40337 213 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 OR1G1P47890 313 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 POLE2P56282 527 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 YWHAGP61981 247 aaKnown RBP eCLIP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 AP1B1Q10567 949 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 RCN2Q14257 317 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 LBHD1Q9BQE6 289 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 ACBD6Q9BR61 282 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 TRIM4Q9C037 500 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 ZCWPW1Q9H0M4 648 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 DTLQ9NZJ0 730 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 SEPT10Q9P0V9 454 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 STOML1Q9UBI4 398 aa14.57□□□□□ -0.08
LIMD1-202ENST00000440097 PRG3Q9Y2Y8 225 aaPredicted RBP14.57□□□□□ -0.08
LIMD1-202ENST00000440097 A0A1W2PQ45 241 aaPredicted RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 A0A1W2PQY0 241 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 BCLAF3A2AJT9 711 aaKnown RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 MOXD2PA6NHM9 499 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 H3BRJ5 948 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 TRAFD1O14545 582 aaPredicted RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 GCAP28676 217 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 VEGFBP49765 207 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SPARCL1Q14515 664 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SLC5A9Q2M3M2 681 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 TRIM71Q2Q1W2 868 aaKnown RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SLC45A4Q5BKX6 768 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 INTS6LQ5JSJ4 861 aaKnown RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 MAP3K21Q5TCX8 1036 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 NCBP2-AS2Q69YL0 99 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 TRABD2AQ86V40 505 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 VPS52Q8N1B4 723 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 DENND1AQ8TEH3 1009 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 LGMNQ99538 433 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 MIPEPQ99797 713 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 WDR83Q9BRX9 315 aaKnown RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 ZFP69BQ9UJL9 534 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 DSEQ9UL01 958 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 CASP8AP2Q9UKL3 1982 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 SMAPO00193 183 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 EEF2KO00418 725 aaKnown RBP14.56□□□□□ -0.08
LIMD1-202ENST00000440097 ELK3P41970 407 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 NR2C2P49116 596 aa14.56□□□□□ -0.08
LIMD1-202ENST00000440097 YWHAHQ04917 246 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms