RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 RPLP0P6Q8NHW5 317 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 WFIKKN2Q8TEU8 576 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 C1orf74Q96LT6 269 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 PRICKLE1Q96MT3 831 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 MCEEQ96PE7 176 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 HAPLN3Q96S86 360 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 CNPY3Q9BT09 278 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 FAM126AQ9BYI3 521 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 CNOT8Q9UFF9 292 aaKnown RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 SCINQ9Y6U3 715 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 MYOFQ9NZM1 2061 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 A0A087X0T9 212 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 H0Y858 1186 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 NPC1O15118 1278 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 FAM228BP0C875 321 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 SP9P0CG40 484 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 CHRM1P11229 460 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 HOXA6P31267 233 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 EIF4A3P38919 411 aaKnown RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 NRLP54845 237 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 ADKP55263 362 aaKnown RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 SEC13P55735 322 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 SATB1Q01826 763 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 CSTF1Q05048 431 aaKnown RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 AUHQ13825 339 aaKnown RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 EIF4HQ15056 248 aaKnown RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 C15orf59Q2T9L4 293 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 ARL13BQ3SXY8 428 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 C5orf22Q49AR2 442 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 C2orf27AQ580R0 203 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 RABGAP1LQ5R372 815 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 PKN3Q6P5Z2 889 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 KIAA0907Q7Z7F0 614 aaPredicted RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 MFN1Q8IWA4 741 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 SFTPA1Q8IWL2 248 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 CAMKK1Q8N5S9 505 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 FIBINQ8TAL6 211 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 FAM172AQ8WUF8 416 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 ZNF653Q96CK0 615 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 MYEOVQ96EZ4 313 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 MRPL47Q9HD33 250 aaKnown RBP12.22□□□□□ -0.45
HSPG2-206ENST00000439717 STIM2Q9P246 746 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 RAPGEFL1Q9UHV5 662 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 CLEC4EQ9ULY5 219 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 SLC8A2Q9UPR5 921 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 HS3ST4Q9Y661 456 aa12.22□□□□□ -0.45
HSPG2-206ENST00000439717 TMEM191CA6NGB0 347 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 PRRT4C9JH25 899 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 TDGF1P13385 188 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 HNRNPLP14866 589 aaKnown RBP eCLIP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 HLA-FP30511 346 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 TIE1P35590 1138 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 ATXN1P54253 815 aaKnown RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 HDAC4P56524 1084 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 RPL7AP62424 266 aaKnown RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 SLC18A3Q16572 532 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 CDO1Q16878 200 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 GEN1Q17RS7 908 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 ASTE1Q2TB18 679 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 EOGTQ5NDL2 527 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 CCDC122Q5T0U0 273 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 FBXL22Q6P050 247 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 FAM131BQ86XD5 332 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 AHI1Q8N157 1196 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 CFAP52Q8N1V2 620 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 ZNF513Q8N8E2 541 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 IL17RCQ8NAC3 791 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 FNIP1Q8TF40 1166 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 UCMAQ8WVF2 138 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 NELL1Q92832 810 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 ATOH1Q92858 354 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 RPRD1AQ96P16 312 aaPredicted RBP12.21□□□□□ -0.45
HSPG2-206ENST00000439717 SIK2Q9H0K1 926 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 DEF6Q9H4E7 631 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 ANLNQ9NQW6 1124 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 ELOVL2Q9NXB9 296 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 GGA2Q9UJY4 613 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 MMP17Q9ULZ9 603 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 NENFQ9UMX5 172 aa12.21□□□□□ -0.45
HSPG2-206ENST00000439717 A0A1B0GVM2 712 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 TCAF2A6NFQ2 919 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 DRGXA6NNA5 263 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 H0Y626 953 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 I6L893 689 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 K7ESF4 209 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 CCP110O43303 1012 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 CLDN11O75508 207 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 KLF8O95600 359 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 PABPC1P11940 636 aaKnown RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 ADRA1BP35368 520 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 AIF1P55008 147 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 OXCT1P55809 520 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 NRG1Q02297 640 aaPredicted RBP12.2□□□□□ -0.46
HSPG2-206ENST00000439717 SLC12A1Q13621 1099 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 CDH18Q13634 790 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 DMC1Q14565 340 aa12.2□□□□□ -0.46
HSPG2-206ENST00000439717 SH3PXD2AQ5TCZ1 1133 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms