RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 TSSK4Q6SA08 328 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 ALLCQ8N6M5 410 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 IL17RCQ8NAC3 791 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 JOSD2Q8TAC2 188 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 FIBINQ8TAL6 211 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 WFIKKN2Q8TEU8 576 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 FAM122AQ96E09 287 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 SIK2Q9H0K1 926 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 SEMA4AQ9H3S1 761 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 CLEC4EQ9ULY5 219 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 PCDHGA2Q9Y5H1 932 aa16.94■□□□□ 0.3
CTSD-205ENST00000438213 PRRT4C9JH25 899 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 K7ESF4 209 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 ADCY5O95622 1261 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 MYBL1P10243 752 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 GPD1P21695 349 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 NTSR1P30989 418 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 SGSHP51688 502 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 DGKEP52429 567 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 AUHQ13825 339 aaKnown RBP16.93■□□□□ 0.3
CTSD-205ENST00000438213 EIF4HQ15056 248 aaKnown RBP16.93■□□□□ 0.3
CTSD-205ENST00000438213 OTUD1Q5VV17 481 aaPredicted RBP16.93■□□□□ 0.3
CTSD-205ENST00000438213 RNF43Q68DV7 783 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 TRNP1Q6NT89 227 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 LRRC31Q6UY01 552 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 STRADAQ7RTN6 431 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 BNIPLQ7Z465 357 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 MFN1Q8IWA4 741 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 CFAP52Q8N1V2 620 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 CARNMT1Q8N4J0 409 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 TXNDC5Q8NBS9 432 aaKnown RBP16.93■□□□□ 0.3
CTSD-205ENST00000438213 OLIG1Q8TAK6 271 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 CENPIQ92674 756 aaPredicted RBP16.93■□□□□ 0.3
CTSD-205ENST00000438213 NELL1Q92832 810 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 C1orf74Q96LT6 269 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 HAPLN3Q96S86 360 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 PRMT1Q99873 361 aaKnown RBP16.93■□□□□ 0.3
CTSD-205ENST00000438213 ISCUQ9H1K1 167 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 FAM86C1Q9NVL1 165 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 C2orf42Q9NWW7 574 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 ELOVL2Q9NXB9 296 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 CALCOCO1Q9P1Z2 691 aa16.93■□□□□ 0.3
CTSD-205ENST00000438213 MYO18AQ92614 2054 aaKnown RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 CCDC163A0A0D9SF12 145 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 TCRBV5S1A1TA0A578 114 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 H0Y626 953 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 ZBTB24O43167 697 aaPredicted RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 ALDH1A2O94788 518 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 GJB6O95452 261 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 PABPC1P11940 636 aaKnown RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 TDGF1P13385 188 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 HNRNPLP14866 589 aaKnown RBP eCLIP16.92■□□□□ 0.3
CTSD-205ENST00000438213 NBL1P41271 181 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 ZNF143P52747 638 aaPredicted RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 OXCT1P55809 520 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 MAMLD1Q13495 774 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 CDH18Q13634 790 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 CRY1Q16526 586 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 CDO1Q16878 200 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 GEN1Q17RS7 908 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 PLEKHA7Q6IQ23 1121 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 FBXL22Q6P050 247 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 LONP2Q86WA8 852 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 FAM131BQ86XD5 332 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 CNGA4Q8IV77 575 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 CHPFQ8IZ52 775 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.92■□□□□ 0.3
CTSD-205ENST00000438213 ZBTB44Q8NCP5 570 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 TSTD1Q8NFU3 115 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 PRICKLE1Q96MT3 831 aaPredicted RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 RPRD1AQ96P16 312 aaPredicted RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 MCEEQ96PE7 176 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 PPP1R9BQ96SB3 815 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 DNAJC7Q99615 494 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 ADAM33Q9BZ11 813 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 MRPL47Q9HD33 250 aaKnown RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 POLMQ9NP87 494 aaPredicted RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 ABCB8Q9NUT2 735 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 KIAA1522Q9P206 1035 aaPredicted RBP16.92■□□□□ 0.3
CTSD-205ENST00000438213 GGA2Q9UJY4 613 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 PLA2G4CQ9UP65 541 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 HS3ST4Q9Y661 456 aa16.92■□□□□ 0.3
CTSD-205ENST00000438213 LUC7L3O95232 432 aaKnown RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 MOCS3O95396 460 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 APBB3O95704 486 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 ATP5BP06576 529 aaKnown RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 POLR2EP19388 210 aaKnown RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 HLA-FP30511 346 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 CNR2P34972 360 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 RPL7AP62424 266 aaKnown RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 C15orf59Q2T9L4 293 aaPredicted RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 PPP1R15BQ5SWA1 713 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 EGFLAMQ63HQ2 1017 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 HEATR6Q6AI08 1181 aaKnown RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 ALKBH5Q6P6C2 394 aaKnown RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 CHST9Q7L1S5 443 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 TMC6Q7Z403 805 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 KIAA0907Q7Z7F0 614 aaPredicted RBP16.91■□□□□ 0.3
CTSD-205ENST00000438213 GAS2L3Q86XJ1 694 aa16.91■□□□□ 0.3
CTSD-205ENST00000438213 AHI1Q8N157 1196 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms