RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 ITM2CQ9NQX7 267 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 DDX43Q9NXZ2 648 aaKnown RBP8.8□□□□□ -1
R3HDM1-208ENST00000438014 FTSJ1Q9UET6 329 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 LRWD1Q9UFC0 647 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 CPSF3Q9UKF6 684 aaKnown RBP8.8□□□□□ -1
R3HDM1-208ENST00000438014 GTF3C4Q9UKN8 822 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 BTBD3Q9Y2F9 522 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 CORINQ9Y5Q5 1042 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 HECTD1Q9ULT8 2610 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 KIAA1549LQ6ZVL6 1849 aa8.8□□□□□ -1
R3HDM1-208ENST00000438014 TENM4Q6N022 2769 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 MYO16Q9Y6X6 1858 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 A0A1B0GVT2 93 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 ZNF840PA6NDX5 716 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 E9PMD0 336 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 PDPK1O15530 556 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 HOXC11O43248 304 aaPredicted RBP8.79□□□□□ -1
R3HDM1-208ENST00000438014 SLC28A2O43868 658 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 PCDHGA12O60330 932 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 DFNA5O60443 496 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 HUS1O60921 280 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 REC8O95072 547 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 MBL2P11226 248 aaPredicted RBP8.79□□□□□ -1
R3HDM1-208ENST00000438014 ANXA13P27216 316 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 PCSK1P29120 753 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 LHX1P48742 406 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 CCT8P50990 548 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 AFF3P51826 1226 aaKnown RBP8.79□□□□□ -1
R3HDM1-208ENST00000438014 BNC1Q01954 994 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 CCDC173Q0VFZ6 552 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 MYO1EQ12965 1108 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 STARD3Q14849 445 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 ZNF174Q15697 407 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 GRAMD4Q6IC98 578 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 VSTM1Q6UX27 236 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 DENND5BQ6ZUT9 1274 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 WDR89Q96FK6 387 aaPredicted RBP8.79□□□□□ -1
R3HDM1-208ENST00000438014 MSTO1Q9BUK6 570 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 NUP58Q9BVL2 599 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 RUSC1Q9BVN2 902 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 TM6SF1Q9BZW5 370 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 CD248Q9HCU0 757 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 PDRG1Q9NUG6 133 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 SMPD4Q9NXE4 827 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 LARSQ9P2J5 1176 aaKnown RBP8.79□□□□□ -1
R3HDM1-208ENST00000438014 MAGEC2Q9UBF1 373 aaPredicted RBP8.79□□□□□ -1
R3HDM1-208ENST00000438014 EIF2B4Q9UI10 523 aaKnown RBP8.79□□□□□ -1
R3HDM1-208ENST00000438014 SH3BP1Q9Y3L3 701 aa8.79□□□□□ -1
R3HDM1-208ENST00000438014 A0A0B4J269 797 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 A0A1W2PQH9 124 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 HNRNPDLO14979 420 aaKnown RBP8.78□□□□□ -1
R3HDM1-208ENST00000438014 OIP5O43482 229 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 FAM189A1O60320 539 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 PFKFB2O60825 505 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 OLFM2O95897 454 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 PLCG1P19174 1290 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 AMPD1P23109 780 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 GRIK1P39086 918 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 CSNK1EP49674 416 aaKnown RBP8.78□□□□□ -1
R3HDM1-208ENST00000438014 ZNF132P52740 706 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 TMPRSS3P57727 454 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 POU5F1Q01860 360 aaKnown RBP8.78□□□□□ -1
R3HDM1-208ENST00000438014 TARDBPQ13148 414 aaKnown RBP eCLIP8.78□□□□□ -15e-6■■■■□ 20
R3HDM1-208ENST00000438014 KIF19Q2TAC6 998 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 ANO4Q32M45 955 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 KRT79Q5XKE5 535 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 MIB1Q86YT6 1006 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 FMNL3Q8IVF7 1028 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 SPACA3Q8IXA5 215 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 PDCL2Q8N4E4 241 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 ZSCAN1Q8NBB4 408 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 KCNN1Q92952 543 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 IGSF8Q969P0 613 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 XPO6Q96QU8 1125 aaKnown RBP8.78□□□□□ -1
R3HDM1-208ENST00000438014 ACOX2Q99424 681 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 DNAJC7Q99615 494 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 PCED1AQ9H1Q7 454 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 SPHK2Q9NRA0 654 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 GMIPQ9P107 970 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 REV1Q9UBZ9 1251 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 IL17BQ9UHF5 180 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 COL6A6A6NMZ7 2263 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 DENND4CQ5VZ89 1909 aa8.78□□□□□ -1
R3HDM1-208ENST00000438014 LOC100289279A0A1B0GTE1 492 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 PYCARD-AS1I3L0S3 204 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 TERTO14746 1132 aaKnown RBP8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 RFPL3O75679 317 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 LDOC1O95751 146 aaPredicted RBP8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 PIGRP01833 764 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 SLFN14P0C7P3 912 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 ACAT1P24752 427 aaKnown RBP8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 E2F5Q15329 346 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 MAPRE1Q15691 268 aaKnown RBP8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 TBC1D25Q3MII6 688 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 TDRD10Q5VZ19 366 aaKnown RBP8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 FAM171BQ6P995 826 aa8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 DMRTC2Q8IXT2 367 aaPredicted RBP8.77□□□□□ -1.01
R3HDM1-208ENST00000438014 ZNF248Q8NDW4 579 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms