RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 TOP3BO95985 862 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 DNTTP04053 509 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 VDRP11473 427 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 LCP1P13796 627 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 POLR2EP19388 210 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 MAOBP27338 520 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 HOXD9P28356 352 aaPredicted RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 PPP1R2P41236 205 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 MATKP42679 507 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 PRCPP42785 496 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 AFF3P51826 1226 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 SFSWAPQ12872 951 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 CDH18Q13634 790 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 BECN1Q14457 450 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 STILQ15468 1287 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 TRIP4Q15650 581 aaPredicted RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 INAVAQ3KP66 663 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CBWD6Q4V339 395 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CBWD3Q5JTY5 395 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CBWD5Q5RIA9 395 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 ADGRF1Q5T601 910 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 ZNF658Q5TYW1 1059 aaPredicted RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 DCAF12L1Q5VU92 463 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 RNF219Q5W0B1 726 aaPredicted RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 PM20D1Q6GTS8 502 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 TMEM270Q6UE05 265 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 LRSAM1Q6UWE0 723 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CHST9Q7L1S5 443 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 ADAT2Q7Z6V5 191 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 UNC45BQ8IWX7 931 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 PPM1KQ8N3J5 372 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CHCHD4Q8N4Q1 142 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 HJURPQ8NCD3 748 aaPredicted RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 OR2T3Q8NH03 318 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 UBA3Q8TBC4 463 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 SORCS1Q8WY21 1168 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 DNASE2BQ8WZ79 361 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 PIWIL1Q96J94 861 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 TRIM62Q9BVG3 475 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CD248Q9HCU0 757 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CD93Q9NPY3 652 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 CNGB3Q9NQW8 809 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 ITM2CQ9NQX7 267 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 WSB2Q9NYS7 404 aaPredicted RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 EIF2B4Q9UI10 523 aaKnown RBP8.08□□□□□ -1.12
VPS50-203ENST00000436177 GGA2Q9UJY4 613 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 KLK13Q9UKR3 277 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 MSRB2Q9Y3D2 182 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 PCDHB4Q9Y5E5 795 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 MYO16Q9Y6X6 1858 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 NUP205Q92621 2012 aa8.08□□□□□ -1.12
VPS50-203ENST00000436177 ZZEF1O43149 2961 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 DSPP15924 2871 aaKnown RBP8.07□□□□□ -1.12
VPS50-203ENST00000436177 YJEFN3A6XGL0 299 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 E7ENQ6 273 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 TULP2O00295 520 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 O00370 1275 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 IRAK2O43187 625 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 FBXO21O94952 628 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 FSBPO95073 299 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 MOCS3O95396 460 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 PAEPP09466 180 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 DLDP09622 509 aaKnown RBP8.07□□□□□ -1.12
VPS50-203ENST00000436177 FTH1P19P0C7X4 201 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 HLA-EP13747 358 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 CD59P13987 128 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 RGS7P49802 495 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 TBX4P57082 545 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 NUCB2P80303 420 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 ZBTB16Q05516 673 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 CAMK2GQ13555 558 aaPredicted RBP8.07□□□□□ -1.12
VPS50-203ENST00000436177 ENPP2Q13822 863 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 SUZ12Q15022 739 aaKnown RBP8.07□□□□□ -1.12
VPS50-203ENST00000436177 MSS51Q4VC12 460 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 MBLAC2Q68D91 279 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 ZNF776Q68DI1 518 aaPredicted RBP8.07□□□□□ -1.12
VPS50-203ENST00000436177 KLHL10Q6JEL2 608 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 LCLAT1Q6UWP7 414 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 MFN1Q8IWA4 741 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 FAM217AQ8IXS0 508 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 CYB5D2Q8WUJ1 264 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 KCTD13Q8WZ19 329 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 IRGQQ8WZA9 623 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 NDRG1Q92597 394 aaKnown RBP8.07□□□□□ -1.12
VPS50-203ENST00000436177 GATA6Q92908 595 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 SKA1Q96BD8 255 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 FAM149B1Q96BN6 582 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 CEP63Q96MT8 703 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 CAMK1GQ96NX5 476 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 CDC6Q99741 560 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 BTBD1Q9H0C5 482 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 GAREM1Q9H706 876 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 ST7Q9NRC1 585 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 STIM2Q9P246 746 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 SFMBT1Q9UHJ3 866 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 WASF3Q9UPY6 502 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 NCKAP1Q9Y2A7 1128 aa8.07□□□□□ -1.12
VPS50-203ENST00000436177 COQ4Q9Y3A0 265 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms