RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TMPRSS7Q7RTY8 843 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 FMR1NBQ8N0W7 255 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 SIX6OS1Q8N1H7 587 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 ZNF366Q8N895 744 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 UBA3Q8TBC4 463 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 RNF139Q8WU17 664 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 IRGQQ8WZA9 623 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 BIRC7Q96CA5 298 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 TMA16Q96EY4 203 aaKnown RBP11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 TM9SF3Q9HD45 589 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 KIAA1257Q9ULG3 409 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 BTBD3Q9Y2F9 522 aa11.4□□□□□ -0.58
SPTLC1P4-201ENST00000435997 TRIM49BA6NDI0 452 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 IRAK2O43187 625 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 PCDHGA12O60330 932 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 IGHV4-34P06331 123 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CD19P15391 556 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CD27P26842 260 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 RPL34P49207 117 aaKnown RBP11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CSNK1EP49674 416 aaKnown RBP11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ARID5AQ03989 594 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 NNTQ13423 1086 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 COL9A2Q14055 689 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 KCNT1Q5JUK3 1230 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 TCERG1LQ5VWI1 586 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 NUGGCQ68CJ6 796 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 PMF1Q6P1K2 205 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 LAYNQ6UX15 382 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 FAM124AQ86V42 546 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ZNF557Q8N988 423 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 LMO3Q8TAP4 145 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 GOLGA1Q92805 767 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 IGSF8Q969P0 613 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 AZIN2Q96A70 460 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 TTC17Q96AE7 1141 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 MYEOVQ96EZ4 313 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 GSDMAQ96QA5 445 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CDC6Q99741 560 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 BTBD1Q9H0C5 482 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 RSPH9Q9H1X1 276 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SGK2Q9HBY8 427 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 GDPD2Q9HCC8 539 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 RMND1Q9NWS8 449 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ARMCX3Q9UH62 379 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 PLA2G4CQ9UP65 541 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ATP6V1DQ9Y5K8 247 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SNX11Q9Y5W9 270 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 MYH10P35580 1976 aa11.39□□□□□ -0.59
SPTLC1P4-201ENST00000435997 BAHCC1Q9P281 2608 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 FYNP06241 537 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ATP5BP06576 529 aaKnown RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ATXN1LP0C7T5 689 aaKnown RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CTSKP43235 329 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 FMO5P49326 533 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CNGA2Q16280 664 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 HNRNPA1L2Q32P51 320 aaKnown RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 TTC31Q49AM3 519 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ZNF776Q68DI1 518 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ANKRD40Q6AI12 368 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 RFWD3Q6PCD5 774 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 USP30Q70CQ3 517 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 MFN1Q8IWA4 741 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 UNC45BQ8IWX7 931 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 KDM1BQ8NB78 822 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 FIBINQ8TAL6 211 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SETD7Q8WTS6 366 aaKnown RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CLEC4CQ8WTT0 213 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SNX19Q92543 992 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 KAT5Q92993 513 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SLC39A13Q96H72 371 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CCDC34Q96HJ3 373 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 FCRL2Q96LA5 508 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 MRGPRX3Q96LB0 322 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 HSFY1Q96LI6 401 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 TSG101Q99816 390 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 PABPC3Q9H361 631 aaKnown RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SERGEFQ9UGK8 458 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 INTS6Q9UL03 887 aaKnown RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ANKRD6Q9Y2G4 727 aa11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ANKRD11Q6UB99 2663 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P4-201ENST00000435997 FASNP49327 2511 aaKnown RBP11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 GOLGA6L7A0A1B0GV03 622 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 M0QYV0 167 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 RNF225M0QZC1 329 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ACSL4O60488 711 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 TBL1XO60907 577 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 LTFP02788 710 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 DNTTP04053 509 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 ATXN8OSP0DMR3 200 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 LCP1P13796 627 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 BRD2P25440 801 aaKnown RBP11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 GRK6P43250 576 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 SLC11A2P49281 568 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 RGS7P49802 495 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CCT8P50990 548 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 LRMPQ12912 555 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 CAMK2BQ13554 666 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 STILQ15468 1287 aa11.37□□□□□ -0.59
SPTLC1P4-201ENST00000435997 TEAD4Q15561 434 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms