RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 DEUP1Q05D60 604 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 USP39Q53GS9 565 aaKnown RBP16.83■□□□□ 0.28
SMPD4-207ENST00000435455 FIGNQ5HY92 759 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 BRMS1LQ5PSV4 323 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 RABGAP1LQ5R372 815 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 RAP1GAP2Q684P5 730 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 PPP1R2P3Q6NXS1 205 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 KIAA0907Q7Z7F0 614 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-207ENST00000435455 MFN1Q8IWA4 741 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 AHI1Q8N157 1196 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 FIBINQ8TAL6 211 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 PCDHB18PQ96TA0 734 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 ACOX2Q99424 681 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 GABRG3Q99928 467 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 HINFPQ9BQA5 517 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 C11orf70Q9BRQ4 267 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 PIGVQ9NUD9 493 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 CACNA2D2Q9NY47 1150 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 ADAM22Q9P0K1 906 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 BCCIPQ9P287 314 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMPD4-207ENST00000435455 THAP10Q9P2Z0 257 aaPredicted RBP16.83■□□□□ 0.28
SMPD4-207ENST00000435455 GGA2Q9UJY4 613 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 GMEB2Q9UKD1 530 aa16.83■□□□□ 0.28
SMPD4-207ENST00000435455 SDK1Q7Z5N4 2213 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 LRRC53A6NM62 1247 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 GSCP56915 257 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 STARD3Q14849 445 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 ASIC2Q16515 512 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 ACBD5Q5T8D3 534 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 TTC39BQ5VTQ0 682 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 SFMBT2Q5VUG0 894 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 OTUD1Q5VV17 481 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 C11orf74Q86VG3 221 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 PHF13Q86YI8 300 aaPredicted RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 MDGA1Q8NFP4 955 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 HMGB4Q8WW32 186 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 IQCDQ96DY2 449 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 TBCBQ99426 244 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 PRMT1Q99873 361 aaKnown RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 NUP58Q9BVL2 599 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 TPSD1Q9BZJ3 242 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 TTYH3Q9C0H2 523 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 WDCPQ9H6R7 721 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 METTL5Q9NRN9 209 aaKnown RBP16.82■□□□□ 0.28
SMPD4-207ENST00000435455 AIPL1Q9NZN9 384 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 STON1Q9Y6Q2 735 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 CFAP54Q96N23 3096 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 RALGAPA1Q6GYQ0 2036 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 PLXND1Q9Y4D7 1925 aa16.82■□□□□ 0.28
SMPD4-207ENST00000435455 A0A1W2PQF6 199 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 TPM3P06753 285 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 RETP07949 1114 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 POLR2EP19388 210 aaKnown RBP16.81■□□□□ 0.28
SMPD4-207ENST00000435455 TNFAIP3P21580 790 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 PTP4A2Q12974 167 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 CDH18Q13634 790 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 ENPP2Q13822 863 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 BYSLQ13895 437 aaKnown RBP16.81■□□□□ 0.28
SMPD4-207ENST00000435455 ZNF234Q14588 700 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 NFKBIBQ15653 356 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 LPAL2Q16609 132 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 TMEM215Q68D42 235 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 LRSAM1Q6UWE0 723 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 CHST9Q7L1S5 443 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 CFAP52Q8N1V2 620 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 PGBD3Q8N328 593 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 CARNMT1Q8N4J0 409 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 WFDC5Q8TCV5 224 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 MYEOVQ96EZ4 313 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 TSPY26PQ9H489 355 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 PLA2G4CQ9UP65 541 aa16.81■□□□□ 0.28
SMPD4-207ENST00000435455 CKAP5Q14008 2032 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 A0A1B0GVM2 712 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 TCAF2A6NFQ2 919 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 H0Y626 953 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 LUC7L3O95232 432 aaKnown RBP16.8■□□□□ 0.28
SMPD4-207ENST00000435455 ATP5BP06576 529 aaKnown RBP16.8■□□□□ 0.28
SMPD4-207ENST00000435455 PDGFRAP16234 1089 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-207ENST00000435455 CD70P32970 193 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 PBX1P40424 430 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 PRKCIP41743 596 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 ELF2Q15723 593 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 MBLAC2Q68D91 279 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 MON1BQ7L1V2 547 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 ADIPOR2Q86V24 386 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 FAM160A2Q8N612 972 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-207ENST00000435455 GPR161Q8N6U8 529 aaKnown RBP16.8■□□□□ 0.28
SMPD4-207ENST00000435455 C3orf20Q8ND61 904 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 OLIG1Q8TAK6 271 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 LOXL4Q96JB6 756 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 ZC3H10Q96K80 434 aaKnown RBP16.8■□□□□ 0.28
SMPD4-207ENST00000435455 CFAP57Q96MR6 1250 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 RPRD1AQ96P16 312 aaPredicted RBP16.8■□□□□ 0.28
SMPD4-207ENST00000435455 SYT11Q9BT88 431 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 ADAM33Q9BZ11 813 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
SMPD4-207ENST00000435455 ARHGEF38Q9NXL2 777 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms