RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 BORCS6Q96GS4 357 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NSL1Q96IY1 281 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HEXIM2Q96MH2 286 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HNRNPABQ99729 332 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TSEN34Q9BSV6 310 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 BEGAINQ9BUH8 593 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RHOBTB2Q9BYZ6 727 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ASPSCR1Q9BZE9 553 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TAS2R13Q9NYV9 303 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 AKT3Q9Y243 479 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MOXD2PA6NHM9 499 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TTC36A6NLP5 189 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 XPO1O14980 1071 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM127O75204 238 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ASLP04424 464 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 UMPSP11172 480 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DARSP14868 501 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NPR3P17342 541 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 GSTM2P28161 218 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LRPAP1P30533 357 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 GNL1P36915 607 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NOMO3P69849 1222 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 IFI35P80217 286 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CSTF3Q12996 717 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 EZH2Q15910 746 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TAZQ16635 292 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RNASEH2BQ5TBB1 312 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 BNC2Q6ZN30 1099 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DSG4Q86SJ6 1040 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 C7orf31Q8N865 590 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RDH13Q8NBN7 331 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MINDY2Q8NBR6 621 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 OPTNQ96CV9 577 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM176AQ96HP8 235 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NUDT12Q9BQG2 462 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SGIP1Q9BQI5 828 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SLC39A3Q9BRY0 314 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SYT11Q9BT88 431 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DBNDD1Q9H9R9 158 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DNAJC28Q9NX36 388 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 APPL1Q9UKG1 709 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 H0Y3Z8 333 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 H7C0C1 242 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DDX3XO00571 662 aaKnown RBP eCLIP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CD3EAPO15446 510 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TGFB1I1O43294 461 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HSPA4LO95757 839 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HOXA13P31271 388 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 NOS2P35228 1153 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ATP5OP48047 213 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 KYNUQ16719 465 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HIBCHQ6NVY1 386 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DCLRE1AQ6PJP8 1040 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RNF180Q86T96 592 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 FBXO25Q8TCJ0 367 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF333Q96JL9 665 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 HAPLN3Q96S86 360 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUSP16Q9BY84 665 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SLC29A3Q9BZD2 475 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 UNC45AQ9H3U1 944 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 FBRSQ9HAH7 460 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM9Q9P0T7 183 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 VPS51Q9UID3 782 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PIGBOS1A0A0B4J2F0 54 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 A0A1B0GW55 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PIPSLA2A3N6 862 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM189-UBE2V1I3L0A0 370 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TRIM13O60858 407 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 SERPINF2P08697 491 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUX4L2P0CJ85 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUX4L3P0CJ86 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUX4L4P0CJ87 422 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUX4L5P0CJ88 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUX4L6P0CJ89 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUX4L7P0CJ90 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CROCCP3Q8IVE0 287 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 RP9Q8TA86 221 aaKnown RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CKAP2Q8WWK9 683 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 KLRG1Q96E93 195 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ZFYVE28Q9HCC9 887 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 AASDHPPTQ9NRN7 309 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DUX4Q9UBX2 424 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 MAPK8IP1Q9UQF2 711 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TLDC2A0PJX2 215 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 EVPLLA8MZ36 301 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 FAM155AB1AL88 458 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 LIASO43766 372 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ZNF623O75123 536 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ACSL3O95573 720 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 ACPPP15309 386 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 GUCY2FP51841 1108 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CACHD1Q5VU97 1274 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TMEM110Q86TL2 294 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 DCAKDQ8WVC6 231 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CD101Q93033 1021 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 CXorf40BQ96DE9 158 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 PANX3Q96QZ0 392 aa3.86□□□□□ -1.79
SHPRH-205ENST00000433355 KLF6Q99612 283 aaPredicted RBP3.86□□□□□ -1.79
SHPRH-205ENST00000433355 TINF2Q9BSI4 451 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms