RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.34■■□□□ 1.97
TMEM248-205ENST00000433271 SH3RF2Q8TEC5 729 aa27.34■■□□□ 1.97
TMEM248-205ENST00000433271 FGF13Q92913 245 aa27.34■■□□□ 1.97
TMEM248-205ENST00000433271 ARHGEF4Q9NR80 690 aa27.34■■□□□ 1.97
TMEM248-205ENST00000433271 CCL26Q9Y258 94 aa27.34■■□□□ 1.97
TMEM248-205ENST00000433271 E9PAM4 449 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 KRIT1O00522 736 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 ARTNQ5T4W7 220 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 SLC9A4Q6AI14 798 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 LRRC31Q6UY01 552 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 Q7L0L9 218 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 C14orf80Q86SX3 495 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 ZSCAN18Q8TBC5 510 aaPredicted RBP27.33■■□□□ 1.97
TMEM248-205ENST00000433271 MYLIPQ8WY64 445 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 STIM2Q9P246 746 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 ZNF510Q9Y2H8 683 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 SH3BP1Q9Y3L3 701 aa27.33■■□□□ 1.97
TMEM248-205ENST00000433271 DAPK3O43293 454 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 EPHB2P29323 1055 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 HOXC13P31276 330 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 MTHFRP42898 656 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 FAM133BQ5BKY9 247 aaKnown RBP27.32■■□□□ 1.96
TMEM248-205ENST00000433271 RAP1GAP2Q684P5 730 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 CHSY1Q86X52 802 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 ZNF683Q8IZ20 524 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 ZDHHC14Q8IZN3 488 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 SPATA4Q8NEY3 305 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 DDX50Q9BQ39 737 aaKnown RBP27.32■■□□□ 1.96
TMEM248-205ENST00000433271 CARD6Q9BX69 1037 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 AP1M1Q9BXS5 423 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 VANGL2Q9ULK5 521 aa27.32■■□□□ 1.96
TMEM248-205ENST00000433271 GOLGA6L7A0A1B0GV03 622 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 PRAMEF12O95522 483 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 TCF3P15923 654 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 ZFXP17010 805 aaPredicted RBP27.31■■□□□ 1.96
TMEM248-205ENST00000433271 AMPD1P23109 780 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 DYNLT1P63172 113 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 SIX1Q15475 284 aaPredicted RBP27.31■■□□□ 1.96
TMEM248-205ENST00000433271 HABP4Q5JVS0 413 aaKnown RBP27.31■■□□□ 1.96
TMEM248-205ENST00000433271 FBXL22Q6P050 247 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 GET4Q7L5D6 327 aaPredicted RBP27.31■■□□□ 1.96
TMEM248-205ENST00000433271 SMRP1Q8NCR6 262 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 TBC1D31Q96DN5 1066 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 RPGRIP1Q96KN7 1286 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 PPARGC1AQ9UBK2 798 aaKnown RBP27.31■■□□□ 1.96
TMEM248-205ENST00000433271 NEU3Q9UQ49 428 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 NR2E1Q9Y466 385 aa27.31■■□□□ 1.96
TMEM248-205ENST00000433271 IGLV3-10A0A075B6K4 115 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 GOLGA6L10A0A0M3HER8 536 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 E2F8A0AVK6 867 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 CTAGE15A4D2H0 777 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 APOL1O14791 398 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 CTAGE8P0CG41 777 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 TACR2P21452 398 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 RWDD4Q6NW29 188 aaKnown RBP27.3■■□□□ 1.96
TMEM248-205ENST00000433271 CTAGE6Q86UF2 777 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 CTAGE4Q8IX94 777 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 HELZP42694 1942 aaKnown RBP27.3■■□□□ 1.96
TMEM248-205ENST00000433271 F5H5T6 163 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 FGF10O15520 208 aaPredicted RBP27.3■■□□□ 1.96
TMEM248-205ENST00000433271 DEFB123Q8N688 67 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 PLD5Q8N7P1 536 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 TTC16Q8NEE8 873 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 CATSPERBQ9H7T0 1116 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 CDH7Q9ULB5 785 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 BRWD1Q9NSI6 2320 aa27.3■■□□□ 1.96
TMEM248-205ENST00000433271 DRGXA6NNA5 263 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 DCLK1O15075 740 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 ERCC2P18074 760 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 SLC6A4P31645 630 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 C5orf22Q49AR2 442 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 FAM78AQ5JUQ0 283 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 CELF5Q8N6W0 485 aaKnown RBP27.29■■□□□ 1.96
TMEM248-205ENST00000433271 PRELID2Q8N945 189 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 TTC13Q8NBP0 860 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 SMARCD2Q92925 531 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 ASB16Q96NS5 453 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 NECTIN4Q96NY8 510 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 KIF9Q9HAQ2 790 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 HOMER3Q9NSC5 361 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 CD207Q9UJ71 328 aa27.29■■□□□ 1.96
TMEM248-205ENST00000433271 APOC4-APOC2K7ER74 178 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 RIOK3O14730 519 aaKnown RBP27.28■■□□□ 1.96
TMEM248-205ENST00000433271 APOC2P02655 101 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 TGM2P21980 687 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 ZNF77Q15935 545 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 FAM217AQ8IXS0 508 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 LGI2Q8N0V4 545 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 GUCD1Q96NT3 240 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 RBM12Q9NTZ6 932 aaKnown RBP27.28■■□□□ 1.96
TMEM248-205ENST00000433271 ETNK2Q9NVF9 386 aa27.28■■□□□ 1.96
TMEM248-205ENST00000433271 CCDC188H7C350 402 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 USP4Q13107 963 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 NCBP2-AS2Q69YL0 99 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 RFWD3Q6PCD5 774 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 TMCO3Q6UWJ1 677 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 BBS7Q8IWZ6 715 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 KIAA1958Q8N8K9 716 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 RIN3Q8TB24 985 aa27.27■■□□□ 1.96
TMEM248-205ENST00000433271 IGSF8Q969P0 613 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms