RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 C1orf216Q8TAB5 229 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 LMO3Q8TAP4 145 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 CYB5D2Q8WUJ1 264 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 ZSWIM1Q9BR11 485 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 TRIM62Q9BVG3 475 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 BTBD1Q9H0C5 482 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 GAREM1Q9H706 876 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 SUN2Q9UH99 717 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 PCOLCE2Q9UKZ9 415 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 SCML1Q9UN30 329 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 APOBEC2Q9Y235 224 aaKnown RBP15.48■□□□□ 0.07
MSH5-208ENST00000429846 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.48■□□□□ 0.07
MSH5-208ENST00000429846 PCDHGB2Q9Y5G2 931 aa15.48■□□□□ 0.07
MSH5-208ENST00000429846 SRRM3A6NNA2 597 aaPredicted RBP15.47■□□□□ 0.07
MSH5-208ENST00000429846 FLRT2O43155 660 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 CBFA2T3O75081 653 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 GABBR2O75899 941 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 ASLP04424 464 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 BRD2P25440 801 aaKnown RBP15.47■□□□□ 0.07
MSH5-208ENST00000429846 ACSL1P33121 698 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 RPL34P49207 117 aaKnown RBP15.47■□□□□ 0.07
MSH5-208ENST00000429846 BECN1Q14457 450 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 TEAD4Q15561 434 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 ZNF776Q68DI1 518 aaPredicted RBP15.47■□□□□ 0.07
MSH5-208ENST00000429846 TTI2Q6NXR4 508 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 RFWD3Q6PCD5 774 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 BEND5Q7L4P6 421 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 PKD1L2Q7Z442 2459 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 ZNF366Q8N895 744 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 KDM1BQ8NB78 822 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 FIBINQ8TAL6 211 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 WFDC5Q8TCV5 224 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 SNX19Q92543 992 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 CAMK1GQ96NX5 476 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 SGK2Q9HBY8 427 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 PRSS16Q9NQE7 514 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 TM7SF3Q9NS93 570 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 NYNRINQ9P2P1 1898 aaKnown RBP15.47■□□□□ 0.07
MSH5-208ENST00000429846 TLR6Q9Y2C9 796 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 ASPMQ8IZT6 3477 aa15.47■□□□□ 0.07
MSH5-208ENST00000429846 TMEM131Q92545 1883 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 RNF225M0QZC1 329 aaPredicted RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 SEMA4FO95754 770 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 GNA14O95837 355 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 SLC6A4P31645 630 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 CD70P32970 193 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 ACADSBP45954 432 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 GRIA4P48058 902 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 ST8SIA6P61647 398 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 RPS14P62263 151 aaKnown RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 SFSWAPQ12872 951 aaKnown RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 HLA-BQ31612 363 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 USP30Q70CQ3 517 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 CCDC117Q8IWD4 279 aaPredicted RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 DQX1Q8TE96 717 aaKnown RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 CLEC4CQ8WTT0 213 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 KAT5Q92993 513 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 TTC17Q96AE7 1141 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 PRICKLE1Q96MT3 831 aaPredicted RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 C6orf106Q9H6K1 298 aaPredicted RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 MAN1B1Q9UKM7 699 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 CNTN6Q9UQ52 1028 aa15.46■□□□□ 0.07
MSH5-208ENST00000429846 FNDC3AQ9Y2H6 1198 aaKnown RBP15.46■□□□□ 0.07
MSH5-208ENST00000429846 TP53BP1Q12888 1972 aaPredicted RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 PIK3R2O00459 728 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 GPD2P43304 727 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 MARSP56192 900 aaKnown RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 BNC1Q01954 994 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 KCNH2Q12809 1159 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 CDH18Q13634 790 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 ARID5BQ14865 1188 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 SUZ12Q15022 739 aaKnown RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 NADSYN1Q6IA69 706 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 KLHL10Q6JEL2 608 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 DBX2Q6ZNG2 339 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 RRAGAQ7L523 313 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 TRIM59Q8IWR1 403 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 BAHD1Q8TBE0 780 aaPredicted RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 SETD7Q8WTS6 366 aaKnown RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 STK32AQ8WU08 396 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 NELFBQ8WX92 580 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 FAM149B1Q96BN6 582 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 LMLNQ96KR4 655 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 FCRL2Q96LA5 508 aaPredicted RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 CDC6Q99741 560 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 MIS12Q9H081 205 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 RSPH9Q9H1X1 276 aaPredicted RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 IL21RQ9HBE5 538 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 KIAA1522Q9P206 1035 aaPredicted RBP15.45■□□□□ 0.06
MSH5-208ENST00000429846 NCKAP1Q9Y2A7 1128 aa15.45■□□□□ 0.06
MSH5-208ENST00000429846 CABIN1Q9Y6J0 2220 aa15.44■□□□□ 0.06
MSH5-208ENST00000429846 KNL1Q8NG31 2342 aa15.44■□□□□ 0.06
MSH5-208ENST00000429846 PTPRBP23467 1997 aa15.44■□□□□ 0.06
MSH5-208ENST00000429846 GOLGA6L7A0A1B0GV03 622 aa15.44■□□□□ 0.06
MSH5-208ENST00000429846 A0A1B0GVT2 93 aa15.44■□□□□ 0.06
MSH5-208ENST00000429846 MED7O43513 233 aa15.44■□□□□ 0.06
MSH5-208ENST00000429846 RNASEH1O60930 286 aaKnown RBP15.44■□□□□ 0.06
MSH5-208ENST00000429846 MOCS3O95396 460 aa15.44■□□□□ 0.06
MSH5-208ENST00000429846 APOEP02649 317 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms