RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 SCML1Q9UN30 329 aa16.06■□□□□ 0.16
CTDSP1-202ENST00000428361 LAMA1P25391 3075 aa16.06■□□□□ 0.16
CTDSP1-202ENST00000428361 ASCC3Q8N3C0 2202 aaKnown RBP16.06■□□□□ 0.16
CTDSP1-202ENST00000428361 H0Y626 953 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 RNASEH1O60930 286 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 TRIM16O95361 564 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 DNTTP04053 509 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 GLI1P08151 1106 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 C7P10643 843 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 COPAP53621 1224 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 FAM133BQ5BKY9 247 aaKnown RBP16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 TMEM215Q68D42 235 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 TRIM65Q6PJ69 517 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 TMEM110Q86TL2 294 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 ADIPOR2Q86V24 386 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 SCUBE3Q8IX30 993 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 CLEC4CQ8WTT0 213 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 SORCS1Q8WY21 1168 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 SLC4A5Q9BY07 1137 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 TMEM51Q9NW97 253 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 CEP83Q9Y592 693 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 CACNA1EQ15878 2313 aa16.05■□□□□ 0.16
CTDSP1-202ENST00000428361 METTL12A8MUP2 240 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 GIPC1O14908 333 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 CER1O95813 267 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 MTIF2P46199 727 aaKnown RBP16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 OXCT1P55809 520 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 YWHAZP63104 245 aaKnown RBP16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 PTK2Q05397 1052 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 FOXC1Q12948 553 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 EFHC1Q5JVL4 640 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 TTC39BQ5VTQ0 682 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 DCAF12L1Q5VU92 463 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 RFWD3Q6PCD5 774 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 PIP4P1Q86T03 277 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 ATP6V0D2Q8N8Y2 350 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 CYB5D2Q8WUJ1 264 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 SLC39A13Q96H72 371 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 BTN2A3PQ96KV6 586 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 FCRL2Q96LA5 508 aaPredicted RBP16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 PPP1R9BQ96SB3 815 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 BTBD1Q9H0C5 482 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 MIR1-1HGQ9H1L0 117 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.04■□□□□ 0.161e-8■■■■■ 33.1
CTDSP1-202ENST00000428361 ASNSD1Q9NWL6 643 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 CHMP5Q9NZZ3 219 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 STIM2Q9P246 746 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 NCKAP1Q9Y2A7 1128 aa16.04■□□□□ 0.16
CTDSP1-202ENST00000428361 CHD8Q9HCK8 2581 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 E5RJQ4 531 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 BCAT2O15382 392 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 GABBR2O75899 941 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 NNMTP40261 264 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 USP8P40818 1118 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 CDK17Q00537 523 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 PDCLQ13371 301 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 SLC12A1Q13621 1099 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 TEAD4Q15561 434 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 CAMK4Q16566 473 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 MS4A13Q5J8X5 152 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 RNF219Q5W0B1 726 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 ZNF776Q68DI1 518 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 DENND1BQ6P3S1 775 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 TAC4Q86UU9 113 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 CHSY1Q86X52 802 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 CARNMT1Q8N4J0 409 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 TTC17Q96AE7 1141 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 CRACR2AQ9BSW2 395 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 SGK2Q9HBY8 427 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 CD93Q9NPY3 652 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 KIAA1522Q9P206 1035 aaPredicted RBP16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 NAALADL1Q9UQQ1 740 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 PCDHB9Q9Y5E1 797 aa16.03■□□□□ 0.16
CTDSP1-202ENST00000428361 TMEM8BA6NDV4 472 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 KCNJ18B7U540 433 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 F5H5T6 163 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 PAPSS1O43252 624 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 HSF2BPO75031 334 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 LUC7L3O95232 432 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 TRUB2O95900 331 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 MOCS2O96007 188 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 SRPRAP08240 638 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 HLA-EP13747 358 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 ABCB4P21439 1286 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 SLC6A4P31645 630 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 CD70P32970 193 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 BPIFB4P59827 614 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 SIM1P81133 766 aaPredicted RBP16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 GRIK2Q13002 908 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 MAN2A1Q16706 1144 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 PTPRNQ16849 979 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 ARHGAP44Q17R89 818 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 ZNF423Q2M1K9 1284 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 RABGAP1LQ5R372 815 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 USP30Q70CQ3 517 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 CACUL1Q86Y37 369 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 ZCCHC9Q8N567 271 aaKnown RBP16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 SHC3Q92529 594 aa16.02■□□□□ 0.16
CTDSP1-202ENST00000428361 FAM204AQ9H8W3 233 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms