RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RSPH9Q9H1X1 276 aaPredicted RBP15.27■□□□□ 0.04
PDAP1-202ENST00000426447 PABPC3Q9H361 631 aaKnown RBP15.27■□□□□ 0.04
PDAP1-202ENST00000426447 MTG2Q9H4K7 406 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 LRRC4Q9HBW1 653 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 SFMBT1Q9UHJ3 866 aa15.27■□□□□ 0.04
PDAP1-202ENST00000426447 A0A1W2PP55 124 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 CALUO43852 315 aaPredicted RBP15.26■□□□□ 0.03
PDAP1-202ENST00000426447 TBL1XO60907 577 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 RNASEH2AO75792 299 aaKnown RBP15.26■□□□□ 0.03
PDAP1-202ENST00000426447 WNT1P04628 370 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 KRT13P13646 458 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 ACTN2P35609 894 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 ACADVLP49748 655 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 CFHR1Q03591 330 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 CCDC173Q0VFZ6 552 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 KMT5BQ4FZB7 885 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 SLC45A4Q5BKX6 768 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 RAB41Q5JT25 222 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 C1orf220Q5T0J3 134 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 FBXL19Q6PCT2 694 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 KIAA0907Q7Z7F0 614 aaPredicted RBP15.26■□□□□ 0.03
PDAP1-202ENST00000426447 GRAMD1CQ8IYS0 662 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDAP1-202ENST00000426447 ANKRD52Q8NB46 1076 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 EDEM1Q92611 657 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 IPO9Q96P70 1041 aaKnown RBP15.26■□□□□ 0.03
PDAP1-202ENST00000426447 NEUROG2Q9H2A3 272 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 KCTD10Q9H3F6 313 aa15.26■□□□□ 0.03
PDAP1-202ENST00000426447 CAPN8A6NHC0 703 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 YEATS4O95619 227 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 LATS1O95835 1130 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 TRIM49P0CI25 452 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 TRIM49CP0CI26 452 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 GLDCP23378 1020 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 CD70P32970 193 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 CXADRP78310 365 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 BNIP3Q12983 259 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 SHBQ15464 509 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 TAF1BQ53T94 588 aaPredicted RBP15.25■□□□□ 0.03
PDAP1-202ENST00000426447 BSPRYQ5W0U4 402 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 PM20D1Q6GTS8 502 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 DHX40Q8IX18 779 aaKnown RBP15.25■□□□□ 0.03
PDAP1-202ENST00000426447 ZC3H3Q8IXZ2 948 aaKnown RBP15.25■□□□□ 0.03
PDAP1-202ENST00000426447 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 KIAA0895Q8NCT3 520 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 OR2T34Q8NGX1 318 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 SNIP1Q8TAD8 396 aaKnown RBP15.25■□□□□ 0.03
PDAP1-202ENST00000426447 SERAC1Q96JX3 654 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 EBF2Q9HAK2 575 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 STIM2Q9P246 746 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 STOML2Q9UJZ1 356 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 SHROOM3Q8TF72 1996 aa15.25■□□□□ 0.03
PDAP1-202ENST00000426447 CKAP5Q14008 2032 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 J3QKU1 62 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 TLR4O00206 839 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 MID1O15344 667 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 BRINP1O60477 761 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 SIN3BO75182 1162 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 CKMT2P17540 419 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 EPHA8P29322 1005 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-202ENST00000426447 SLC8A1P32418 973 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 ME1P48163 572 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 SGSHP51688 502 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 PPP3CAQ08209 521 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 ILKQ13418 452 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 CST6Q15828 149 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 ARHGAP17Q68EM7 881 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 RFWD3Q6PCD5 774 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 INTS8Q75QN2 995 aaKnown RBP15.24■□□□□ 0.03
PDAP1-202ENST00000426447 MMAAQ8IVH4 418 aaKnown RBP15.24■□□□□ 0.03
PDAP1-202ENST00000426447 MFN1Q8IWA4 741 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 CCDC117Q8IWD4 279 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-202ENST00000426447 ZNF557Q8N988 423 aaPredicted RBP15.24■□□□□ 0.03
PDAP1-202ENST00000426447 SLC4A11Q8NBS3 891 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 TSC1Q92574 1164 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 CISHQ9NSE2 258 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 ABCC13Q9NSE7 274 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 SERGEFQ9UGK8 458 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 SERTAD1Q9UHV2 236 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 TMEM131Q92545 1883 aa15.24■□□□□ 0.03
PDAP1-202ENST00000426447 CABIN1Q9Y6J0 2220 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3DA0A087WVF3 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3IA0A087WXS9 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3EA0A087X179 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3KA0A087X1G2 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 GOLGA6L7A0A1B0GV03 622 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3FA6NER0 549 aaPredicted RBP15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3LB9A6J9 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 MAPK13O15264 365 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 MSI1O43347 362 aaKnown RBP15.23■□□□□ 0.03
PDAP1-202ENST00000426447 KLRC4O43908 158 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 TBC1D3HP0C7X1 549 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 SLC11A2P49281 568 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 CCR5P51681 352 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 RAD23BP54727 409 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 GOLGA7BQ2TAP0 167 aa15.23■□□□□ 0.03
PDAP1-202ENST00000426447 HNRNPA1L2Q32P51 320 aaKnown RBP15.23■□□□□ 0.03
PDAP1-202ENST00000426447 FOXD4L6Q3SYB3 417 aaPredicted RBP15.23■□□□□ 0.03
PDAP1-202ENST00000426447 MPP7Q5T2T1 576 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms