RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 NFE2L1Q14494 772 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 GRM7Q14831 915 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 TRADDQ15628 312 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 MAPKAPK3Q16644 382 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 TYSND1Q2T9J0 566 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 LSM12Q3MHD2 195 aaKnown RBP3.92□□□□□ -1.78
SF3B1-205ENST00000424674 GLRA4Q5JXX5 417 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 FAM69AQ5T7M9 428 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 PRAMEF9Q5VWM5 478 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 FAM180AQ6UWF9 173 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 ADGRE4PQ86SQ3 457 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 TMEM200AQ86VY9 491 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 C1orf210Q8IVY1 113 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 PEX5LQ8IYB4 626 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 SCML4Q8N228 414 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 D2HGDHQ8N465 521 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 VGLL2Q8N8G2 317 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 GMCL1P1Q8NEA9 526 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 Q8NFD4 153 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 KIF18AQ8NI77 898 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 SCAMP5Q8TAC9 235 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 METTL6Q8TCB7 284 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 KCNG4Q8TDN1 519 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 VPS50Q96JG6 964 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 TUBGCP5Q96RT8 1024 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 OSBPL6Q9BZF3 934 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 DPH1Q9BZG8 443 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 KRT23Q9C075 422 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 FTOQ9C0B1 505 aaKnown RBP eCLIP3.92□□□□□ -1.78
SF3B1-205ENST00000424674 POFUT1Q9H488 388 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 VEZTQ9HBM0 779 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 IL1RAPL2Q9NP60 686 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 TCF7L2Q9NQB0 619 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 ZBTB40Q9NUA8 1239 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 C5AR2Q9P296 337 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 CGNQ9P2M7 1197 aaKnown RBP3.92□□□□□ -1.78
SF3B1-205ENST00000424674 IL19Q9UHD0 177 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 HSF4Q9ULV5 492 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 AURKCQ9UQB9 309 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 LIPT1Q9Y234 373 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 BTBD3Q9Y2F9 522 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 MRPL11Q9Y3B7 192 aaKnown RBP3.92□□□□□ -1.78
SF3B1-205ENST00000424674 PCDHA3Q9Y5H8 950 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 POMT1Q9Y6A1 747 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 SESN1Q9Y6P5 492 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 LMTK3Q96Q04 1460 aa3.92□□□□□ -1.78
SF3B1-205ENST00000424674 LRRD1A4D1F6 860 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 VWA3AA6NCI4 1184 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 SAC3D1A6NKF1 404 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 A8MV72 311 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PROM1O43490 865 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 SMPD2O60906 423 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 DDHD2O94830 711 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 PRLP01236 227 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TFRCP02786 760 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 C1SP09871 688 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 RHOXF2BP0C7M4 288 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 UBL4AP11441 157 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TYMPP19971 482 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 HIBADHP31937 336 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CIITAP33076 1130 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 MCM7P33993 719 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ACAA2P42765 397 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 AMPHP49418 695 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ARFIP2P53365 341 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 BCAT1P54687 386 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ROM1Q03395 351 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 DDR1Q08345 913 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 MYO1EQ12965 1108 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 RALGDSQ12967 914 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ZBTB17Q13105 803 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 RAB32Q13637 225 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CAMK1Q14012 370 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 FHL2Q14192 279 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CRYMQ14894 314 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 RAB39AQ14964 217 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 NTRK2Q16620 822 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ZNF805Q5CZA5 627 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 C9orf152Q5JTZ5 239 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TTC38Q5R3I4 469 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TAF3Q5VWG9 929 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 KIAA1841Q6NSI8 718 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 MTFR2Q6P444 385 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TMEM154Q6P9G4 183 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 DRICH1Q6PGQ1 229 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 UNQ6494/PRO21346Q6UXR6 183 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 C15orf52Q6ZUT6 534 aaKnown RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 DENND5BQ6ZUT9 1274 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 UNC13DQ70J99 1090 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 UBE3BQ7Z3V4 1068 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 KRT28Q7Z3Y7 464 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 GPR149Q86SP6 731 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 DNAAF5Q86Y56 855 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 TUSC5Q8IXB3 177 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 BCL6BQ8N143 479 aaPredicted RBP3.91□□□□□ -1.78
SF3B1-205ENST00000424674 ANKRD35Q8N283 1001 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 SH2D3CQ8N5H7 860 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 CCDC148Q8NFR7 591 aa3.91□□□□□ -1.78
SF3B1-205ENST00000424674 OR5AN1Q8NGI8 311 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms