RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 PIGZQ86VD9 579 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 WBP1Q96G27 269 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 MYO19Q96H55 970 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 IRX2Q9BZI1 471 aaPredicted RBP17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 KCTD10Q9H3F6 313 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 OLA1Q9NTK5 396 aaKnown RBP17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 FBXL12Q9NXK8 326 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 MTMR6Q9Y217 621 aa17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 HBS1LQ9Y450 684 aaKnown RBP17.45■□□□□ 0.38
CHCHD3-202ENST00000423635 MAST4O15021 2626 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 MYLKQ15746 1914 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 FAM47DPA6NHR8 397 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 ERVH48-1M5A8F1 160 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 PDXKO00764 312 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 BRINP1O60477 761 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 CD58P19256 250 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 POLR2EP19388 210 aaKnown RBP17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 EPHA8P29322 1005 aaPredicted RBP17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 ACTN2P35609 894 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 ARRB1P49407 418 aaPredicted RBP17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 STK4Q13043 487 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 CUL4BQ13620 913 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 NCEH1Q6PIU2 408 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 BHLHA9Q7RTU4 235 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 FMNL3Q8IVF7 1028 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 TTC17Q96AE7 1141 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 HEXIM2Q96MH2 286 aaKnown RBP17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 IMPG2Q9BZV3 1241 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 NIF3L1Q9GZT8 377 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 NEUROG2Q9H2A3 272 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 ERVMER34-1Q9H9K5 563 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 GDF3Q9NR23 364 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 ADAMTS1Q9UHI8 967 aa17.44■□□□□ 0.38
CHCHD3-202ENST00000423635 PLXNA2O75051 1894 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 LRRC72A6NJI9 287 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 WNT9AO14904 365 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 MAPK13O15264 365 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 POLR2DO15514 142 aaKnown RBP17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 CUTAO60888 179 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 ZBED1O96006 694 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 NR3C1P04150 777 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 CKMT2P17540 419 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 CCR5P51681 352 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 TKTL1P51854 596 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 BNIP3Q12983 259 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 KCNJ12Q14500 433 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 ARID5BQ14865 1188 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 TBC1D25Q3MII6 688 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 SFMBT2Q5VUG0 894 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 ERICH1Q86X53 443 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 SPACA3Q8IXA5 215 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 DCBLD1Q8N8Z6 715 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 ANKRD52Q8NB46 1076 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 KIAA0895Q8NCT3 520 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 OR2T34Q8NGX1 318 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 GANCQ8TET4 914 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 FAXDC2Q96IV6 333 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 LMLNQ96KR4 655 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 MTG2Q9H4K7 406 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 SERGEFQ9UGK8 458 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 FZD4Q9ULV1 537 aa17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 TPX2Q9ULW0 747 aaKnown RBP17.43■□□□□ 0.38
CHCHD3-202ENST00000423635 ARID1BQ8NFD5 2236 aaPredicted RBP17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 TLR4O00206 839 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 KLRC4O43908 158 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 RNASEH1O60930 286 aaKnown RBP17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 CD70P32970 193 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 VAMP7P51809 220 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 NXPH1P58417 271 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 CXADRP78310 365 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 HNRNPA1L2Q32P51 320 aaKnown RBP17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 ZNF394Q53GI3 561 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 ARHGAP17Q68EM7 881 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 KANSL1Q7Z3B3 1105 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 OXR1Q8N573 874 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 ZNF557Q8N988 423 aaPredicted RBP17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 KDM1BQ8NB78 822 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 WFDC5Q8TCV5 224 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 TAS1R2Q8TE23 839 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 AASDHPPTQ9NRN7 309 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 SFMBT1Q9UHJ3 866 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 CLCA2Q9UQC9 943 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 FRMD4BQ9Y2L6 1034 aa17.42■□□□□ 0.38
CHCHD3-202ENST00000423635 TP53BP1Q12888 1972 aaPredicted RBP17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 A0A1W2PP55 124 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 CYSRT1A8MQ03 144 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 SIN3BO75182 1162 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 GLDCP23378 1020 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 ACP1P24666 158 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 SGSHP51688 502 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 INSM1Q01101 510 aaPredicted RBP17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 ENPEPQ07075 957 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 CCDC173Q0VFZ6 552 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 CST6Q15828 149 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 PIK3R6Q5UE93 754 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 CEP135Q66GS9 1140 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 TTC39CQ8N584 583 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 SLC4A11Q8NBS3 891 aa17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 NDRG1Q92597 394 aaKnown RBP17.41■□□□□ 0.38
CHCHD3-202ENST00000423635 ULBP1Q9BZM6 244 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 261.7 ms