RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ZNF683Q8IZ20 524 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 LGI2Q8N0V4 545 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 RNF10Q8N5U6 811 aaKnown RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 LRRC57Q8N9N7 239 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 HJURPQ8NCD3 748 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 TEKT4Q8WW24 435 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 LZTFL1Q9NQ48 299 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 GPATCH2LQ9NWQ4 482 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 GUCA1BQ9UMX6 200 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 AP4E1Q9UPM8 1137 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 HYOU1Q9Y4L1 999 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 PRR33A8MZF0 331 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 ZSCAN12O43309 604 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 PENKP01210 267 aaPredicted RBP17.56■□□□□ 0.4
COL7A1-202ENST00000422991 COMTP21964 271 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 SSR1P43307 286 aaKnown RBP17.56■□□□□ 0.4
COL7A1-202ENST00000422991 NR1H3Q13133 447 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 SEMA3BQ13214 749 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 CA9Q16790 459 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 HADHQ16836 314 aaKnown RBP17.56■□□□□ 0.4
COL7A1-202ENST00000422991 SMTNL2Q2TAL5 461 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 C5orf22Q49AR2 442 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 MPPE1Q53F39 396 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 BOLA3Q53S33 107 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 MANEALQ5VSG8 457 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 FYB2Q5VWT5 728 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 RNF43Q68DV7 783 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 FBXL22Q6P050 247 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 REXO1L1PQ8IX06 675 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 PYROXD2Q8N2H3 581 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 TTC8Q8TAM2 541 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 CHFRQ96EP1 664 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 MAGEB5Q9BZ81 275 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 ZWILCHQ9H900 591 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 OR12D3Q9UGF7 316 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 VANGL2Q9ULK5 521 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 ALG6Q9Y672 507 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 CAPN6Q9Y6Q1 641 aa17.56■□□□□ 0.4
COL7A1-202ENST00000422991 IGLV3-10A0A075B6K4 115 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 E9PAM4 449 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 NEDD8-MDP1E9PL57 170 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 FAM72CH0Y354 149 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 SPOPO43791 374 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 CYBBP04839 570 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 RARAP10276 462 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 HOXD9P28356 352 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-202ENST00000422991 GJA4P35212 333 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 RPS24P62847 133 aaKnown RBP17.55■□□□□ 0.4
COL7A1-202ENST00000422991 GAD2Q05329 585 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 ANO4Q32M45 955 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 KCNT1Q5JUK3 1230 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 RABGAP1LQ5R372 815 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 IER5LQ5T953 404 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 FAM72AQ5TYM5 149 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 TTC39BQ5VTQ0 682 aaPredicted RBP17.55■□□□□ 0.4
COL7A1-202ENST00000422991 FAM72DQ6L9T8 149 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 POLNQ7Z5Q5 900 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 FAM72BQ86X60 149 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 DDI1Q8WTU0 396 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 EDAQ92838 391 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 BHMTQ93088 406 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 TMA16Q96EY4 203 aaKnown RBP17.55■□□□□ 0.4
COL7A1-202ENST00000422991 BBS2Q9BXC9 721 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 DHX35Q9H5Z1 703 aaKnown RBP17.55■□□□□ 0.4
COL7A1-202ENST00000422991 HEBP1Q9NRV9 189 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 NEU3Q9UQ49 428 aa17.55■□□□□ 0.4
COL7A1-202ENST00000422991 TYW5A2RUC4 315 aaKnown RBP17.54■□□□□ 0.4
COL7A1-202ENST00000422991 CACNG3O60359 315 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 PALMO75781 387 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 KRT7P08729 469 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 TYRP14679 529 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 COL9A1P20849 921 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 L1CAMP32004 1257 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 GJC1P36383 396 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 SOX9P48436 509 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 IRAK1P51617 712 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 DPYSL2Q16555 572 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 MPP7Q5T2T1 576 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 LRRC38Q5VT99 294 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 LRRC31Q6UY01 552 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 KIAA1524Q8TCG1 905 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 HSPH1Q92598 858 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 CD101Q93033 1021 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 IGSF8Q969P0 613 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 RPRD1AQ96P16 312 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-202ENST00000422991 KCTD15Q96SI1 283 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-202ENST00000422991 C8orf33Q9H7E9 229 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-202ENST00000422991 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL7A1-202ENST00000422991 PLK2Q9NYY3 685 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 PIAS3Q9Y6X2 628 aa17.54■□□□□ 0.4
COL7A1-202ENST00000422991 DRGXA6NNA5 263 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 SPECC1L-ADORA2AF8WAN1 911 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 PSTPIP1O43586 416 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 TBL1XO60907 577 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 LRIG2O94898 1065 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 GLULP15104 373 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 CTHP32929 405 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 OPRD1P41143 372 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 ZXDAP98168 799 aa17.53■□□□□ 0.4
COL7A1-202ENST00000422991 SLC44A4Q53GD3 710 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms