RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 MYLK4Q86YV6 388 aaPredicted RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 TNS4Q8IZW8 715 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 DEFB106AQ8N104 65 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 TTC39CQ8N584 583 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 PYDC1Q8WXC3 89 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 AZIN2Q96A70 460 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 PGBD4Q96DM1 585 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 AGAP3Q96P47 875 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 SORT1Q99523 831 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 NXF3Q9H4D5 531 aaKnown RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 CYP4F11Q9HBI6 524 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 GOLGA2P5Q9HBQ8 144 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 KLK14Q9P0G3 267 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 F8W8V4 182 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 H3BRB1 525 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 PDE5AO76074 875 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 SETSIPP0DME0 302 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 CYP2C8P10632 490 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 ZFXP17010 805 aaPredicted RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 ARL4AP40617 200 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 RABGGTBP53611 331 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 EPHB1P54762 984 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 BST2Q10589 180 aaKnown RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 LRRC36Q1X8D7 754 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 DNAL1Q4LDG9 190 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 RABGAP1LQ5R372 815 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 STEAP4Q687X5 459 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 OR52E8Q6IFG1 317 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 NME8Q8N427 588 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 RAB3IL1Q8TBN0 382 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 ZNF483Q8TF39 744 aaPredicted RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 KBTBD7Q8WVZ9 684 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 CCDC124Q96CT7 223 aaKnown RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 MOCOSQ96EN8 888 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
CDH1-202ENST00000422392 ACSS2Q9NR19 701 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 SOX13Q9UN79 622 aa16.24■□□□□ 0.19
CDH1-202ENST00000422392 LOC100653049A0A140TA62 436 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 KCNK1O00180 336 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 SPTLC1O15269 473 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 SIN3BO75182 1162 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 SMIM24O75264 130 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 GLRA3O75311 464 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 ZMPSTE24O75844 475 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 KRT34O76011 436 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 SULT1E1P49888 294 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 TTLL12Q14166 644 aaPredicted RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 LBRQ14739 615 aaKnown RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 TRMT5Q32P41 509 aaKnown RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 DCAF6Q58WW2 860 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 SMYD5Q6GMV2 418 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 C4orf22Q6V702 233 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 RASSF3Q86WH2 238 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 AGR3Q8TD06 166 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.23■□□□□ 0.19
CDH1-202ENST00000422392 MORF4L1Q9UBU8 362 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 APOBEC2Q9Y235 224 aaKnown RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 ZCCHC18P0CG32 403 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 AOC1P19801 751 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 TKTP29401 623 aaKnown RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 TYK2P29597 1187 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 ITGA9Q13797 1035 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 C6orf163Q5TEZ5 329 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 LRRC8BQ6P9F7 803 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 PLD6Q8N2A8 252 aaKnown RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 ANKRD52Q8NB46 1076 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 HIPK4Q8NE63 616 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 SPDYE1Q8NFV5 336 aaPredicted RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 CDKL2Q92772 493 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 FCRL3Q96P31 734 aaPredicted RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 GCOM2Q9BZD3 368 aaPredicted RBP16.23■□□□□ 0.19
CDH1-202ENST00000422392 MAN1C1Q9NR34 630 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 SCOCQ9UIL1 159 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 ANGPTL2Q9UKU9 493 aa16.23■□□□□ 0.19
CDH1-202ENST00000422392 PROCP04070 461 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 CNTFP26441 200 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 IDH3AP50213 366 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 BCAT1P54687 386 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 ADIGQ0VDE8 80 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 LAMC2Q13753 1193 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 GRIK4Q16099 956 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 FOXB2Q5VYV0 432 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 C9orf57Q5W0N0 161 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 RAPH1Q70E73 1250 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 ZDHHC17Q8IUH5 632 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 GPC2Q8N158 579 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 ZNF567Q8N184 647 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 NLGN2Q8NFZ4 835 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 SNX27Q96L92 541 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 PRDM12Q9H4Q4 367 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 NDE1Q9NXR1 346 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 FZD10Q9ULW2 581 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 RPS6KL1Q9Y6S9 549 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 BRCA2P51587 3418 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 ZNF487B1APH4 448 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 CLDN5O00501 218 aa16.22■□□□□ 0.19
CDH1-202ENST00000422392 NCF2P19878 526 aaPredicted RBP16.22■□□□□ 0.19
CDH1-202ENST00000422392 GNL1P36915 607 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms