RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 FAM149B1Q96BN6 582 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 TSC22D3Q99576 134 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 OXCT2Q9BYC2 517 aaPredicted RBP13.31□□□□□ -0.28
LINC00642-201ENST00000419459 ETNK1Q9HBU6 452 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 NGRNQ9NPE2 291 aaKnown RBP13.31□□□□□ -0.28
LINC00642-201ENST00000419459 NKIRAS1Q9NYS0 192 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 ANAPC7Q9UJX3 599 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 TRIOO75962 3097 aa13.31□□□□□ -0.28
LINC00642-201ENST00000419459 TCRBV5S1A1TA0A578 114 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 EME2A4GXA9 379 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 YJEFN3A6XGL0 299 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 A8MUI8 341 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 SOX1O00570 391 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 FSCN2O14926 492 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 RFPL2O75678 378 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 CYP1A2P05177 515 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 EPCAMP16422 314 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 MAN1A1P33908 653 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 RFC1P35251 1148 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 COILP38432 576 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 CLCN4P51793 760 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 ZNF211Q13398 564 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 PDCD2Q16342 344 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 RAB41Q5JT25 222 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 TPGS2Q68CL5 300 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 PLEKHA7Q6IQ23 1121 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 TRNP1Q6NT89 227 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 VCPIP1Q96JH7 1222 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 HSFY1Q96LI6 401 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 EMILIN2Q9BXX0 1053 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 YIPF3Q9GZM5 350 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 CDC42EP4Q9H3Q1 356 aaKnown RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 STARD13Q9Y3M8 1113 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 YIPF1Q9Y548 306 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 DCTN3O75935 186 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 ECEL1O95672 775 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 GLUD1P00367 558 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 KRT3P12035 628 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 ITIH2P19823 946 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 MAGEA11P43364 429 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 RPL34P49207 117 aaKnown RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 PAPOLAP51003 745 aaKnown RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 OGDHQ02218 1023 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 TWF1Q12792 350 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 ZNF697Q5TEC3 545 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 LIN9Q5TKA1 542 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 CWF19L1Q69YN2 538 aaKnown RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 TTC27Q6P3X3 843 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 DENND5BQ6ZUT9 1274 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 CCDC105Q8IYK2 499 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 RIBC1Q8N443 379 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 SLC22A17Q8WUG5 538 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 KCTD13Q8WZ19 329 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 LRCH3Q96II8 777 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 TTYH1Q9H313 450 aaPredicted RBP13.3□□□□□ -0.28
LINC00642-201ENST00000419459 PRDM12Q9H4Q4 367 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 LRRC19Q9H756 370 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 PARVAQ9NVD7 372 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 STRIP2Q9ULQ0 834 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 SSX2IPQ9Y2D8 614 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 INSL5Q9Y5Q6 135 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 HCFC2Q9Y5Z7 792 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 MUC3AQ02505 3323 aa13.3□□□□□ -0.28
LINC00642-201ENST00000419459 ENO4A6NNW6 628 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 TMEM110-MUSTN1A8MSY1 372 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 TRAFD1O14545 582 aaPredicted RBP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 PEX11AO75192 247 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ZBED1O96006 694 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 C8AP07357 584 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 TPBGLP0DKB5 382 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 MYBL1P10243 752 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 BRAFP15056 766 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 NRIP1P48552 1158 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 SLC18A1P54219 525 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 IL9RQ01113 521 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 KLC1Q07866 573 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ZNF252P-AS1Q0IIN9 211 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 SMARCB1Q12824 385 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 NR1H3Q13133 447 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 LRRC14Q15048 493 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 LONRF1Q17RB8 773 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ANO7Q6IWH7 933 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 LILRA6Q6PI73 481 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 RGS9BPQ6ZS82 235 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 BHLHA9Q7RTU4 235 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 ADAT2Q7Z6V5 191 aaKnown RBP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 SLC13A5Q86YT5 568 aaPredicted RBP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 NUP93Q8N1F7 819 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 KREMEN2Q8NCW0 462 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 RNF217Q8TC41 542 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 C2orf15Q8WU43 125 aaKnown RBP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC00642-201ENST00000419459 MCRS1Q96EZ8 462 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 TRIM11Q96F44 468 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 RMDN2Q96LZ7 410 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 VCXQ9H320 206 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 MAN1C1Q9NR34 630 aa13.29□□□□□ -0.28
LINC00642-201ENST00000419459 PAPOLBQ9NRJ5 636 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms