RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 HFE2Q6ZVN8 426 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 TRIM42Q8IWZ5 723 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 CDKL2Q92772 493 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 MED10Q9BTT4 135 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 NDE1Q9NXR1 346 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 FIS1Q9Y3D6 152 aa12.23□□□□□ -0.45
LIMK1-202ENST00000418310 TRDMT1O14717 391 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 CRHR1P34998 444 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 CACNA2D1P54289 1103 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 HSP90AA5PQ58FG0 334 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 TEDDM1Q5T9Z0 273 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 RAPH1Q70E73 1250 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PIGZQ86VD9 579 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PHTF2Q8N3S3 785 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 SPATA6LQ8N4H0 392 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PIWIL2Q8TC59 973 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 MARK4Q96L34 752 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 TSC22D3Q99576 134 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 SLC4A5Q9BY07 1137 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 THAP1Q9NVV9 213 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 STX18Q9P2W9 335 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 SCOCQ9UIL1 159 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PIN4Q9Y237 131 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 A6NHS1 94 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 SDR42E2A6NKP2 422 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 FAM72CH0Y354 149 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 FGF3P11487 239 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 GNAT1P11488 350 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 TSHRP16473 764 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 MRPS35P82673 323 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 SARNPP82979 210 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 FAM72AQ5TYM5 149 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 FAM72DQ6L9T8 149 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 TMEM110Q86TL2 294 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 FAM72BQ86X60 149 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 ACVR1CQ8NER5 493 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PPP4R1Q8TF05 950 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 ATP2A3Q93084 1043 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 ZCWPW1Q9H0M4 648 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PNPLA8Q9NP80 782 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF180Q9UJW8 692 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 LRCH1Q9Y2L9 728 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 CITO14578 2027 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 A0A0A0MRY4 1105 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 E7ENQ6 273 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 MDM4O15151 490 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 IREB2P48200 963 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 HIC1Q14526 733 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PCLAFQ15004 111 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 FAM219BQ5XKK7 198 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 IL31Q6EBC2 164 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 MAVSQ7Z434 540 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 HPS6Q86YV9 775 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 DEFB107AQ8IZN7 70 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 KCNN1Q92952 543 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 MFSD3Q96ES6 412 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 CELF6Q96J87 481 aaKnown RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 SPATA13Q96N96 652 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 QKIQ96PU8 341 aaKnown RBP eCLIP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF184Q99676 751 aaPredicted RBP12.22□□□□□ -0.45
LIMK1-202ENST00000418310 CCDC106Q9BWC9 280 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 ANK1P16157 1881 aa12.22□□□□□ -0.45
LIMK1-202ENST00000418310 PLIN3O60664 434 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 TM7SF2O76062 418 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 SERPINB5P36952 375 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 CCNFP41002 786 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 DPYSL2Q16555 572 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 CERCAMQ5T4B2 595 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 MBLAC2Q68D91 279 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF567Q8N184 647 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 PNPLA1Q8N8W4 532 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 BEST2Q8NFU1 509 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 SLC7A14Q8TBB6 771 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 RNF139Q8WU17 664 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 RGS17Q9UGC6 210 aaPredicted RBP12.21□□□□□ -0.45
LIMK1-202ENST00000418310 C2CD2Q9Y426 696 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 A0A0G2JLL6 359 aaPredicted RBP12.21□□□□□ -0.45
LIMK1-202ENST00000418310 CFLARO15519 480 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 SIN3BO75182 1162 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 GCATO75600 419 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 HSPA4LO95757 839 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 SLC25A27O95847 323 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 AMHP03971 560 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 RALBP11234 206 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 MAP3K7CLP57077 242 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 BST2Q10589 180 aaKnown RBP12.21□□□□□ -0.45
LIMK1-202ENST00000418310 ZRSR2Q15696 482 aaKnown RBP12.21□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF484Q5JVG2 852 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 PDPK2PQ6A1A2 396 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 PRRT2Q7Z6L0 340 aaPredicted RBP12.21□□□□□ -0.45
LIMK1-202ENST00000418310 STRA8Q7Z7C7 330 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 ZNF781Q8N8C0 355 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 EDEM1Q92611 657 aa12.21□□□□□ -0.45
LIMK1-202ENST00000418310 FCRL3Q96P31 734 aaPredicted RBP12.21□□□□□ -0.45
LIMK1-202ENST00000418310 WDR55Q9H6Y2 383 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms