RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 MLH1P40692 756 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 MAGEA3P43357 314 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 PPP2R5DQ14738 602 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 DBN1Q16643 649 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CES3Q6UWW8 571 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 TIFABQ6ZNK6 161 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ZNF534Q76KX8 674 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 TREML1Q86YW5 311 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ZNF669Q96BR6 464 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 YIPF3Q9GZM5 350 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 MFHAS1Q9Y4C4 1052 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 LCTP09848 1927 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 TBX10O75333 385 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 LYPLA1O75608 230 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SMNDC1O75940 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ERVK-10P10266 1014 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 NOS2P35228 1153 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SPRP35270 261 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 UBAP2LQ14157 1087 aaKnown RBP12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CRYBG2Q8N1P7 616 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SLC7A14Q8TBB6 771 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 NDRG1Q92597 394 aaKnown RBP12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CENPIQ92674 756 aaPredicted RBP12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SLC17A6Q9P2U8 582 aa12.02□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 DYNC1LI2O43237 492 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 STRNO43815 780 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 TM7SF2O76062 418 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 HSPA4LO95757 839 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 C1QAP02745 245 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 RALBP11234 206 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 VAV1P15498 845 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 COPAP53621 1224 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 FAM91A1Q658Y4 838 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CYS1Q717R9 158 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 PSTKQ8IV42 348 aaKnown RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 B3GALNT2Q8NCR0 500 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 EBF4Q9BQW3 602 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 LRRC40Q9H9A6 602 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 MTMR10Q9NXD2 777 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 RGS17Q9UGC6 210 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SMIM28A0A1B0GU29 152 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 F8W8V4 182 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 XPO1O14980 1071 aaKnown RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 PLIN3O60664 434 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 HOXA11P31270 313 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 EPHB1P54762 984 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 TPI1P60174 286 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CDK18Q07002 472 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 PDE1CQ14123 709 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ARL13BQ3SXY8 428 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 TEX44Q53QW1 395 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 NET1Q7Z628 596 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CERS2Q96G23 380 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CXCL16Q9H2A7 254 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SLC24A3Q9HC58 644 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SYBUQ9NX95 663 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 FZD10Q9ULW2 581 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ATP9BO43861 1147 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SNNO75324 88 aaPredicted RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 MMP3P08254 477 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 RSPH3Q86UC2 560 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 PPP1R13LQ8WUF5 828 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 RNF34Q969K3 372 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CMTM5Q96DZ9 223 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CYP4F11Q9HBI6 524 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 EIF2B3Q9NR50 452 aaKnown RBP12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 DLGAP2Q9P1A6 1054 aa12.01□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ZNF189O75820 626 aaPredicted RBP12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CPA3P15088 417 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SAT1P21673 171 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ACAT1P24752 427 aaKnown RBP12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 RAP1GDS1P52306 607 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ITGA9Q13797 1035 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ZNF792Q3KQV3 632 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 DUSP28Q4G0W2 176 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 SPANXN3Q5MJ09 141 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 STXBP5Q5T5C0 1151 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ANO7Q6IWH7 933 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 IRGCQ6NXR0 463 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 RIPOR1Q6ZS17 1223 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 RAPH1Q70E73 1250 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 C10orf107Q8IVU9 208 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CLPTM1LQ96KA5 538 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CPNE1Q99829 537 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 STN1Q9H668 368 aaKnown RBP12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 PLAC1Q9HBJ0 212 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 IL1RAPL1Q9NZN1 696 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 MEI4A8MW99 385 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 USP12O75317 370 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 GABBR2O75899 941 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ALDOAP04075 364 aaKnown RBP12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 NPR3P17342 541 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 ABL2P42684 1182 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 CBLBQ13191 982 aa12□□□□□ -0.49
CSPG4P3Y-201ENST00000418188 PCBP1Q15365 356 aaKnown RBP eCLIP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms