RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 OR12D3Q9UGF7 316 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 HS3ST4Q9Y661 456 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 TICRRQ7Z2Z1 1910 aa8.75□□□□□ -1.01
TRIM48-201ENST00000417545 KIF26AQ9ULI4 1882 aaPredicted RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 GOLGA6L7A0A1B0GV03 622 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 LOC730098B7Z3J9 87 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 E9PAM4 449 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 NEDD8-MDP1E9PL57 170 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 H0Y626 953 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 TRDMT1O14717 391 aaKnown RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 TBL1XO60907 577 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 KLKB1P03952 638 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 RARAP10276 462 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ADH5P11766 374 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 EPHB2P29323 1055 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 HTR7P34969 479 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 TAS2R40P59535 323 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 SLC25A11Q02978 314 aaKnown RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ZP2Q05996 745 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 FCHO2Q0JRZ9 810 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 SCAPQ12770 1279 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 TDGQ13569 410 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 CDH18Q13634 790 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 RUNX3Q13761 415 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 AUHQ13825 339 aaKnown RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 PDK2Q15119 407 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ITPRIPL2Q3MIP1 535 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 PIK3R6Q5UE93 754 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 LRRC38Q5VT99 294 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 TRIM68Q6AZZ1 485 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 Q6ZNB5 142 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 BNIPLQ7Z465 357 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 NT5DC3Q86UY8 548 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ZSCAN30Q86W11 494 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 CPNE8Q86YQ8 564 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 RFX6Q8HWS3 928 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 MFN1Q8IWA4 741 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 C17orf53Q8N3J3 647 aaPredicted RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 CARNMT1Q8N4J0 409 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF557Q8N988 423 aaPredicted RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 TTC8Q8TAM2 541 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ADAMTS19Q8TE59 1207 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 WBP2Q969T9 261 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 RSPRY1Q96DX4 576 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 PEBP4Q96S96 227 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 PLA2G2FQ9BZM2 168 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ZYG11BQ9C0D3 744 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 OSBPL2Q9H1P3 480 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 EBF3Q9H4W6 596 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 SPHK2Q9NRA0 654 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 TMPRSS4Q9NRS4 437 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 DONSONQ9NYP3 566 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 XPO7Q9UIA9 1087 aaKnown RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 FBXL21Q9UKT6 434 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 PACSIN2Q9UNF0 486 aaPredicted RBP8.74□□□□□ -1.01
TRIM48-201ENST00000417545 SNX10Q9Y5X0 201 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 REV3LO60673 3130 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 BRWD1Q9NSI6 2320 aa8.74□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 A0A1B0GVM2 712 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 CTAGE9A4FU28 777 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 TCAF2A6NFQ2 919 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 ANHXE9PGG2 379 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 PI4K2BG5E9Z4 385 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 FGF10O15520 208 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 ZRANB2O95218 330 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 RHOCP08134 193 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 ARSAP15289 507 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 TCF4P15884 667 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 CTNNA2P26232 953 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 IL1R2P27930 398 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 CASQ1P31415 396 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 SLC6A4P31645 630 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 L1CAMP32004 1257 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 CTNNA1P35221 906 aaKnown RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 SERPINB6P35237 376 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 ZXDBP98169 803 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 ZNF177Q13360 481 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 EML3Q32P44 896 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 PREPLQ4J6C6 727 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 TJAP1Q5JTD0 557 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 LY6G5CQ5SRR4 150 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 KAZNQ674X7 775 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 NADSYN1Q6IA69 706 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 FBXL22Q6P050 247 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 NUDT18Q6ZVK8 323 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 CFAP52Q8N1V2 620 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 PYROXD2Q8N2H3 581 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 CPXM2Q8N436 756 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 ARFGAP1Q8N6T3 406 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 LRRC57Q8N9N7 239 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 DNASE1L2Q92874 299 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 RNF25Q96BH1 459 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 C1orf74Q96LT6 269 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 C16orf45Q96MC5 204 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 KCTD15Q96SI1 283 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 IRX2Q9BZI1 471 aaPredicted RBP8.73□□□□□ -1.01
TRIM48-201ENST00000417545 LINC00597Q9H2U6 94 aa8.73□□□□□ -1.01
TRIM48-201ENST00000417545 PLK2Q9NYY3 685 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms