RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 AMFRQ9UKV5 643 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 SH3BP1Q9Y3L3 701 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 NUMBLQ9Y6R0 609 aa8.35□□□□□ -1.07
MDC1-203ENST00000417033 COL4A3Q01955 1670 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 LRRD1A4D1F6 860 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ESPNB1AK53 854 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ANHXE9PGG2 379 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 GFRA2O00451 464 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 PSTPIP1O43586 416 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 CREB3O43889 395 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 SRGAP2O75044 1071 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 LRIG2O94898 1065 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ASGR2P07307 311 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 PYGMP11217 842 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 TCF3P15923 654 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 GOT1P17174 413 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 TACR2P21452 398 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 WEE1P30291 646 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 L1CAMP32004 1257 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 CXCR5P32302 372 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 HARS2P49590 506 aaKnown RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 NUMBP49757 651 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 CDH6P55285 790 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 RPS24P62847 133 aaKnown RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 TNK2Q07912 1038 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ADCY2Q08462 1091 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 AUHQ13825 339 aaKnown RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 DPYSL3Q14195 570 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 HADHQ16836 314 aaKnown RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 ALFQ53S48 1182 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 PPP6R3Q5H9R7 873 aaPredicted RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 EFHC2Q5JST6 749 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ERMARDQ5T6L9 678 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 LRRC38Q5VT99 294 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 NUGGCQ68CJ6 796 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 NAIF1Q69YI7 327 aaPredicted RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 FBXL22Q6P050 247 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ADGRD1Q6QNK2 874 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 MFSD7Q6UXD7 560 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 HTR3DQ70Z44 454 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 SND1Q7KZF4 910 aaKnown RBP eCLIP8.34□□□□□ -1.07
MDC1-203ENST00000417033 OTOP3Q7RTS5 596 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 SYCE1Q8N0S2 351 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 LGI2Q8N0V4 545 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 CFAP52Q8N1V2 620 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 ATP6V0D2Q8N8Y2 350 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 TTC8Q8TAM2 541 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 BPIFB1Q8TDL5 484 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 TEKT4Q8WW24 435 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 BHMTQ93088 406 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 BTN2A3PQ96KV6 586 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 PHF7Q9BWX1 381 aaPredicted RBP8.34□□□□□ -1.07
MDC1-203ENST00000417033 KDM4CQ9H3R0 1056 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 KIF9Q9HAQ2 790 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 TRPV4Q9HBA0 871 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ZFP14Q9HCL3 533 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 HPS4Q9NQG7 708 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 ETNK2Q9NVF9 386 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.34□□□□□ -1.07
MDC1-203ENST00000417033 MPP6Q9NZW5 540 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 THEGQ9P2T0 379 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 DNAI1Q9UI46 699 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 VANGL2Q9ULK5 521 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 PCDHA3Q9Y5H8 950 aa8.34□□□□□ -1.07
MDC1-203ENST00000417033 TCRBV7S2A1N4TA0A589 114 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 E2F8A0AVK6 867 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 OTOL1A6NHN0 477 aaPredicted RBP8.33□□□□□ -1.08
MDC1-203ENST00000417033 SOBPA7XYQ1 873 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 E9PAM4 449 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 C3orf80F5H4A9 247 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 TRANK1O15050 2925 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 ZNF185O15231 689 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 CNTN5O94779 1100 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 CYP17A1P05093 508 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 SLC2A3P11169 496 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 KRT10P13645 584 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 DESP17661 470 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 AMPD1P23109 780 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 KDELR1P24390 212 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 IL4RP24394 825 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 MSNP26038 577 aaKnown RBP8.33□□□□□ -1.08
MDC1-203ENST00000417033 KPNA1P52294 538 aaPredicted RBP8.33□□□□□ -1.08
MDC1-203ENST00000417033 MLLT6P55198 1093 aaPredicted RBP8.33□□□□□ -1.08
MDC1-203ENST00000417033 ETF1P62495 437 aaKnown RBP8.33□□□□□ -1.08
MDC1-203ENST00000417033 KRT81Q14533 505 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 RPS6KA1Q15418 735 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 DPYSL2Q16555 572 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 AAK1Q2M2I8 961 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 GAB4Q2WGN9 574 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 ZFYVE27Q5T4F4 411 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 SPOCD1Q6ZMY3 1216 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 TPGS1Q6ZTW0 290 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 POLNQ7Z5Q5 900 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 DDX42Q86XP3 938 aaKnown RBP eCLIP8.33□□□□□ -1.08
MDC1-203ENST00000417033 TMEM25Q86YD3 366 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 UNC45BQ8IWX7 931 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 TP53INP2Q8IXH6 220 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 FAM217AQ8IXS0 508 aa8.33□□□□□ -1.08
MDC1-203ENST00000417033 KATNAL2Q8IYT4 538 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms