RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FARP2O94887 1054 aaPredicted RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 KCNH1O95259 989 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 SNAI1O95863 264 aaPredicted RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 ATP5BP06576 529 aaKnown RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 HLA-DPA1P20036 260 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 ATP6V1C1P21283 382 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 ADCYAP1R1P41586 468 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 SOX10P56693 466 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 YBEYP58557 167 aaPredicted RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 C17orf67Q0P5P2 114 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 LAMB3Q13751 1172 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 EPHA7Q15375 998 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 PARP6Q2NL67 630 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 IYDQ6PHW0 289 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 RBM12BQ8IXT5 1001 aaKnown RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 TRIML2Q8N7C3 387 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 BBOF1Q8ND07 529 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 PPP1R35Q8TAP8 253 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 DNAJC19Q96DA6 116 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 NAP1L3Q99457 506 aaPredicted RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 HGH1Q9BTY7 390 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 DDX47Q9H0S4 455 aaKnown RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 ADAM7Q9H2U9 754 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 ADPRHL2Q9NX46 363 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 SUCLA2Q9P2R7 463 aaPredicted RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 EXTL2Q9UBQ6 330 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 AMACRQ9UHK6 382 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 RPS6KA6Q9UK32 745 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 TTC7AQ9ULT0 858 aaPredicted RBP9.69□□□□□ -0.86
SNHG3-201ENST00000413987 SSX2IPQ9Y2D8 614 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 STK38LQ9Y2H1 464 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 ASB3Q9Y575 518 aa9.69□□□□□ -0.86
SNHG3-201ENST00000413987 WDR64B1ANS9 1081 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 FAM227AF5H4B4 570 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TNPO2O14787 897 aaKnown RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CA12O43570 354 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 SOAT2O75908 522 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ASLP04424 464 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ARF4P18085 180 aaPredicted RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 GNAZP19086 355 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 MARK3P27448 753 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 MAPK4P31152 587 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 S100A5P33763 92 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 PCK1P35558 622 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 GPC3P51654 580 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 NOGQ13253 232 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 SNX1Q13596 522 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ALG11Q2TAA5 492 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ATAT1Q5SQI0 421 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ZBTB33Q86T24 672 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 KIAA0895Q8NCT3 520 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 RFFLQ8WZ73 363 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 HSPH1Q92598 858 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 PRCCQ92733 491 aaPredicted RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 REEP2Q9BRK0 252 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 WNT5BQ9H1J7 359 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 IKZF4Q9H2S9 585 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CD93Q9NPY3 652 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TXLNGQ9NUQ3 528 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 SEPT11Q9NVA2 429 aaKnown RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 GABRQQ9UN88 632 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 MYH10P35580 1976 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 A0A1W2PPL8 197 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 SLC12A8A0AV02 714 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 PDLIM1O00151 329 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 GNA14O95837 355 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TXNP10599 105 aaKnown RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 PCNAP12004 261 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CCNB1P14635 433 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ACADSP16219 412 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 LAG3P18627 525 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TFE3P19532 575 aaPredicted RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CALB2P22676 271 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CDC25CP30307 473 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 KRT76Q01546 638 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 KLC1Q07866 573 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 KCNMA1Q12791 1236 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CUL3Q13618 768 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CNGA2Q16280 664 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TRIM61Q5EBN2 209 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 MORN1Q5T089 497 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ANO7Q6IWH7 933 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TAPT1Q6NXT6 567 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 UNC13DQ70J99 1090 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ANO5Q75V66 913 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 PEX26Q7Z412 305 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CYP2U1Q7Z449 544 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 ARHGAP22Q7Z5H3 698 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 METTL13Q8N6R0 699 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 CEP76Q8TAP6 659 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 DYDC1Q8WWB3 177 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 EZH1Q92800 747 aaPredicted RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 GRAMD1AQ96CP6 724 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 HHIPL1Q96JK4 782 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 MAELQ96JY0 434 aaKnown RBP9.68□□□□□ -0.86
SNHG3-201ENST00000413987 C7orf26Q96N11 449 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TRAPPC9Q96Q05 1148 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 TRIM4Q9C037 500 aa9.68□□□□□ -0.86
SNHG3-201ENST00000413987 KATNBL1Q9H079 304 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms