RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SERPINA4P29622 427 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 SOX2P48431 317 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 C21orf58P58505 322 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 EFR3AQ14156 821 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 DCTN1Q14203 1278 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 ZNF268Q14587 947 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 ZRSR2Q15696 482 aaKnown RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TIGD6Q17RP2 521 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 CEP78Q5JTW2 689 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3GQ6DHY5 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3CQ6IPX1 549 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 DPY19L2P1Q6NXN4 242 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 SRRM1Q8IYB3 904 aaKnown RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 C16orf71Q8IYS4 520 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TBC1D3Q8IZP1 549 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 EXD3Q8N9H8 876 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 OSR1Q8TAX0 266 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 BCAS4Q8TDM0 211 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 FCRL5Q96RD9 977 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TM2D2Q9BX73 214 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 TRIM2Q9C040 744 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 ARL8BQ9NVJ2 186 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 KIF17Q9P2E2 1029 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 RAB21Q9UL25 225 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 GPR52Q9Y2T5 361 aa4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 COPG1Q9Y678 874 aaKnown RBP4.3□□□□□ -1.72
HMGB1P11-201ENST00000413899 DSCR3O14972 297 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 IRAK2O43187 625 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 HNRNPRO43390 633 aaKnown RBP4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 USP12O75317 370 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 BCAR3O75815 825 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 CNTN5O94779 1100 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 HEXIM1O94992 359 aaKnown RBP4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 PLAUP00749 431 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 TK1P04183 234 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 CYP21A2P08686 494 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 HSD3B1P14060 373 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 RPS6KB1P23443 525 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 EPHB2P29323 1055 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 PRKAA2P54646 552 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 SLC37A1P57057 533 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 CFHR1Q03591 330 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 DAZAP2Q15038 168 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 RPS6KA2Q15349 733 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 GORABQ5T7V8 394 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 ANO7Q6IWH7 933 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 ZNF474Q6S9Z5 364 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 RBM44Q6ZP01 1051 aaKnown RBP4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 RASGRP2Q7LDG7 609 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 NEK8Q86SG6 692 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 MOGAT3Q86VF5 341 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 UEVLDQ8IX04 471 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 EXOC8Q8IYI6 725 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 ADGRF3Q8IZF5 1079 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 C3orf49Q96BT1 292 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 GPR78Q96P69 363 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 FAM118BQ9BPY3 351 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 FAM167BQ9BTA0 163 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 HTATIP2Q9BUP3 242 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 SFXN1Q9H9B4 322 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 PRDM16Q9HAZ2 1276 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 MLXIPLQ9NP71 852 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 ADARB2Q9NS39 739 aaKnown RBP4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 PCDHGB3Q9Y5G1 929 aa4.29□□□□□ -1.72
HMGB1P11-201ENST00000413899 EMSYQ7Z589 1322 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 SMIM35A0A1B0GVV1 85 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 E7EVH7 732 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 INPPL1O15357 1258 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 TGM2P21980 687 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 MPGP29372 298 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 HOXA7P31268 230 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 RCAN1P53805 252 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 SSBP2P81877 361 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 SRSF4Q08170 494 aaKnown RBP4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 PPFIA1Q13136 1202 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 CUL4BQ13620 913 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 TMEM95Q3KNT9 176 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 ADCK5Q3MIX3 580 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 MIS18BP1Q6P0N0 1132 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 RRAGAQ7L523 313 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 ANKS1BQ7Z6G8 1248 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 ZNF575Q86XF7 245 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 HERC6Q8IVU3 1022 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 SUGP1Q8IWZ8 645 aaKnown RBP4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 CLEC4CQ8WTT0 213 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 ZFPM2Q8WW38 1151 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 IGFBPL1Q8WX77 278 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 RUBCNQ92622 972 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 ATP2A3Q93084 1043 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 PIGSQ96S52 555 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 PRSS22Q9GZN4 317 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 MYH16Q9H6N6 1097 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 PDGFCQ9NRA1 345 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 RASSF1Q9NS23 344 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 DGKBQ9Y6T7 804 aa4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 COL11A2P13942 1736 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P11-201ENST00000413899 B9A039 149 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 AKR1A1P14550 325 aa4.27□□□□□ -1.73
HMGB1P11-201ENST00000413899 TFEBP19484 476 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms