RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TRUB2O95900 331 aaKnown RBP17.75■□□□□ 0.43
PTPRC-206ENST00000413409 ITGAVP06756 1048 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 IL1R2P27930 398 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 MIPP30301 263 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 GNL1P36915 607 aaPredicted RBP17.75■□□□□ 0.43
PTPRC-206ENST00000413409 ACADSBP45954 432 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 LIMK1P53667 647 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 SLC6A3Q01959 620 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 DSC1Q08554 894 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 BYSLQ13895 437 aaKnown RBP17.75■□□□□ 0.43
PTPRC-206ENST00000413409 SF3A2Q15428 464 aaKnown RBP17.75■□□□□ 0.43
PTPRC-206ENST00000413409 OASLQ15646 514 aaKnown RBP17.75■□□□□ 0.43
PTPRC-206ENST00000413409 DENND2CQ68D51 928 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 KDM7AQ6ZMT4 941 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 TRMT10CQ7L0Y3 403 aaKnown RBP17.75■□□□□ 0.43
PTPRC-206ENST00000413409 VSIG1Q86XK7 387 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 TMEM109Q9BVC6 243 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 FAM49BQ9NUQ9 324 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 MIOSQ9NXC5 875 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 FNIP2Q9P278 1114 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 NDRG2Q9UN36 371 aaKnown RBP17.75■□□□□ 0.43
PTPRC-206ENST00000413409 GIT1Q9Y2X7 761 aa17.75■□□□□ 0.43
PTPRC-206ENST00000413409 CHURC1-FNTBB4DL54 471 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 TP73O15350 636 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 KRT10P13645 584 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 KDELR1P24390 212 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 FNTBP49356 437 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 LILRA4P59901 499 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 SATB1Q01826 763 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 PDE4CQ08493 712 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 PMF1Q6P1K2 205 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 NPAS3Q8IXF0 933 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 ALLCQ8N6M5 410 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 SLC35B2Q8TB61 432 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 TEKT4Q8WW24 435 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 RXFP2Q8WXD0 754 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 ZBTB9Q96C00 473 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 HSFY1Q96LI6 401 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 TBCBQ99426 244 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 TMEM121BQ9BXQ6 578 aaPredicted RBP17.74■□□□□ 0.43
PTPRC-206ENST00000413409 DPEP3Q9H4B8 488 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 ZWILCHQ9H900 591 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 FBXW11Q9UKB1 542 aa17.74■□□□□ 0.43
PTPRC-206ENST00000413409 MRPS17Q9Y2R5 130 aaKnown RBP17.74■□□□□ 0.43
PTPRC-206ENST00000413409 ZNF487B1APH4 448 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 CCL16O15467 120 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 KCNK5O95279 499 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 PDGFRAP16234 1089 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 PTPN9P43378 593 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 RGS7P49802 495 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 ADCY2Q08462 1091 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 GAS6Q14393 721 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 KAZNQ674X7 775 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 TRNP1Q6NT89 227 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 PRSS55Q6UWB4 352 aaPredicted RBP17.73■□□□□ 0.43
PTPRC-206ENST00000413409 SLC26A9Q7LBE3 791 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 GOLGA2P5Q9HBQ8 144 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 PCDH9Q9HC56 1237 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.73■□□□□ 0.43
PTPRC-206ENST00000413409 HCFC1R1Q9NWW0 138 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 DNPEPQ9ULA0 475 aa17.73■□□□□ 0.43
PTPRC-206ENST00000413409 SMG1Q96Q15 3661 aaKnown RBP17.73■□□□□ 0.43
PTPRC-206ENST00000413409 PAPSS1O43252 624 aaPredicted RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ENDOD1O94919 500 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 NR1D1P20393 614 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 PAX3P23760 479 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 HOXC13P31276 330 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 SDC4P31431 198 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ADCY8P40145 1251 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ARSEP51690 589 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ITGA8P53708 1063 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 IFFO1Q0D2I5 559 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 CCDC6Q16204 474 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 USP41Q3LFD5 358 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 AASDHQ4L235 1098 aaPredicted RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 CYP4V2Q6ZWL3 525 aaPredicted RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 OSTM1Q86WC4 334 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 RELL1Q8IUW5 271 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 TMEM86AQ8N2M4 240 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 FAM160A2Q8N612 972 aaPredicted RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ARFGAP2Q8N6H7 521 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 SPATA18Q8TC71 538 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ING5Q8WYH8 240 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 PIWIL1Q96J94 861 aaKnown RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 HNRNPABQ99729 332 aaKnown RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 LMAN1LQ9HAT1 526 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ANAPC5Q9UJX4 755 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ARL5CA6NH57 179 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 SRRM3A6NNA2 597 aaPredicted RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 TULP2O00295 520 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 DNALI1O14645 258 aaPredicted RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 GABRDO14764 452 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 XPO1O14980 1071 aaKnown RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 RIPK2O43353 540 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 PRPSAP2O60256 369 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 FOXD2O60548 495 aaPredicted RBP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 ECI2O75521 394 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 HNRNPA1P09651 372 aaKnown RBP eCLIP17.72■□□□□ 0.43
PTPRC-206ENST00000413409 CCDC130P13994 396 aa17.72■□□□□ 0.43
PTPRC-206ENST00000413409 RPL9P32969 192 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms