RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 FOXJ1Q92949 421 aa17.16■□□□□ 0.34
SCAMP4-203ENST00000411971 NUCKS1Q9H1E3 243 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-203ENST00000411971 SLC32A1Q9H598 525 aa17.16■□□□□ 0.34
SCAMP4-203ENST00000411971 STIM2Q9P246 746 aa17.16■□□□□ 0.34
SCAMP4-203ENST00000411971 CNTN6Q9UQ52 1028 aa17.16■□□□□ 0.34
SCAMP4-203ENST00000411971 LAMA5O15230 3695 aa17.16■□□□□ 0.34
SCAMP4-203ENST00000411971 PKD1L2Q7Z442 2459 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 ZFYVE26Q68DK2 2539 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 A0A1B0GTW7 788 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 LATS1O95835 1130 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 NUMBP49757 651 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 TBX4P57082 545 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 RPS14P62263 151 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 NUCB2P80303 420 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 WDR45BQ5MNZ6 344 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 SYCP2LQ5T4T6 812 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 LAYNQ6UX15 382 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 CFAP52Q8N1V2 620 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 PNPLA1Q8N8W4 532 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 SLC39A13Q96H72 371 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 MRGPRX3Q96LB0 322 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 ORAI3Q9BRQ5 295 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 INTS2Q9H0H0 1204 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 LHX5Q9H2C1 402 aa17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 FNDC3AQ9Y2H6 1198 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 DSPP15924 2871 aaKnown RBP17.15■□□□□ 0.34
SCAMP4-203ENST00000411971 BECN2A8MW95 431 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 PAPSS1O43252 624 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 TIMM44O43615 452 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 CBFA2T3O75081 653 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 SYPP08247 313 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 CTSOP43234 321 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 GCNT1Q02742 428 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 RING1Q06587 406 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 TAF5Q15542 800 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 KCNT1Q5JUK3 1230 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 RABEPKQ7Z6M1 372 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 SLCO6A1Q86UG4 719 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 TAC4Q86UU9 113 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 WFIKKN2Q8TEU8 576 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 HSFY1Q96LI6 401 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 NUP58Q9BVL2 599 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 SRRTQ9BXP5 876 aaKnown RBP17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 SERGEFQ9UGK8 458 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 AJAP1Q9UKB5 411 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 CELSR3Q9NYQ7 3312 aa17.14■□□□□ 0.33
SCAMP4-203ENST00000411971 A0A1B0GVT2 93 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 P4HA2O15460 535 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 CAPNS1P04632 268 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 DLDP09622 509 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 ACADMP11310 421 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 OXTRP30559 389 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 STIM1Q13586 685 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 RAB44Q7Z6P3 723 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 NAXDQ8IW45 347 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 AHI1Q8N157 1196 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 CRACR2AQ9BSW2 395 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 SLC4A5Q9BY07 1137 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 SUSD2Q9UGT4 822 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 NFE2L3Q9Y4A8 694 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 NEUROG3Q9Y4Z2 214 aa17.13■□□□□ 0.33
SCAMP4-203ENST00000411971 TAF4O00268 1085 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 KCNK3O14649 394 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 BCAT2O15382 392 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 MOCS2O96007 188 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 AFPP02771 609 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 GNSP15586 552 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 CSKP41240 450 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 ARID5AQ03989 594 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 EIF4EBP2Q13542 120 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 TRIP6Q15654 476 aaKnown RBP17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 DCAF6Q58WW2 860 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 MS4A13Q5J8X5 152 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 MPP7Q5T2T1 576 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 FOXR2Q6PJQ5 311 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 IRF2BP1Q8IU81 584 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 MFN1Q8IWA4 741 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 WDTC1Q8N5D0 677 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 FIBINQ8TAL6 211 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 TTC17Q96AE7 1141 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 BIRC7Q96CA5 298 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 GAREM1Q9H706 876 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 EBF2Q9HAK2 575 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 UBE2TQ9NPD8 197 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 ST7Q9NRC1 585 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 PLA2G4CQ9UP65 541 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 BTBD3Q9Y2F9 522 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 MSRB2Q9Y3D2 182 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 NBEAQ8NFP9 2946 aa17.12■□□□□ 0.33
SCAMP4-203ENST00000411971 SRRM3A6NNA2 597 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 TTC34A8MYJ7 566 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 E5RJQ4 531 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 SIN3BO75182 1162 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 FBXO21O94952 628 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 LETM1O95202 739 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 IGLV3-25P01717 112 aa17.11■□□□□ 0.33
SCAMP4-203ENST00000411971 POLR2EP19388 210 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms