RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ZNF530Q6P9A1 599 aaPredicted RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 SFTPA1Q8IWL2 248 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 XAGE5Q8WWM1 108 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 ASB2Q96Q27 587 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 THUMPD2Q9BTF0 503 aaKnown RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 QTRT1Q9BXR0 403 aaKnown RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 ZBTB26Q9HCK0 441 aa5.05□□□□□ -1.6
CLK1-203ENST00000409769 HEYLQ9NQ87 328 aaPredicted RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 GAR1Q9NY12 217 aaKnown RBP5.05□□□□□ -1.6
CLK1-203ENST00000409769 FANCIQ9NVI1 1328 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 A8MVJ9 347 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 CHL1O00533 1208 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 APOL1O14791 398 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 CD19P15391 556 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 SLC5A2P31639 672 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 CALD1Q05682 793 aaKnown RBP5.04□□□□□ -1.6
CLK1-203ENST00000409769 SUPT20HL1Q3ZLR7 823 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 MAP9Q49MG5 647 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 CERKLQ49MI3 558 aaPredicted RBP5.04□□□□□ -1.6
CLK1-203ENST00000409769 C1orf141Q5JVX7 400 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 MEX3CQ5U5Q3 659 aaKnown RBP5.04□□□□□ -1.6
CLK1-203ENST00000409769 IZUMO3Q5VZ72 239 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 TRIM72Q6ZMU5 477 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 MCM10Q7L590 875 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 OR2C3Q8N628 320 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 SIRT6Q8N6T7 355 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 CYP2W1Q8TAV3 490 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 LENG8Q96PV6 779 aaPredicted RBP5.04□□□□□ -1.6
CLK1-203ENST00000409769 PRR25Q96S07 402 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
CLK1-203ENST00000409769 BABAM1Q9NWV8 329 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 AMFRQ9UKV5 643 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 TRPC5Q9UL62 973 aaPredicted RBP5.04□□□□□ -1.6
CLK1-203ENST00000409769 RIMKLBQ9ULI2 386 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 FNDC1Q4ZHG4 1894 aaPredicted RBP5.04□□□□□ -1.6
CLK1-203ENST00000409769 BCL9O00512 1426 aa5.04□□□□□ -1.6
CLK1-203ENST00000409769 RNF123Q5XPI4 1314 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 OR2W5A6NFC9 320 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 VNN1O95497 513 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 HSP90AB1P08238 724 aaKnown RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 NHLRC4P0CG21 123 aaPredicted RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 HGFP14210 728 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 ENGP17813 658 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 POLGP54098 1239 aaPredicted RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 FOXG1P55316 489 aaPredicted RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 SUMO2P61956 95 aaKnown RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 E2F1Q01094 437 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 LONRF1Q17RB8 773 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 DGKKQ5KSL6 1271 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 KIAA0408Q6ZU52 694 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 PTCHD4Q6ZW05 846 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 USP49Q70CQ1 688 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 CCDC33Q8N5R6 958 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 C8orf58Q8NAV2 365 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 MBD3L2Q8NHZ7 208 aaPredicted RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 PIGOQ8TEQ8 1089 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 DAZAP1Q96EP5 407 aaKnown RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 RIPOR3Q96MK2 946 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 SNX18Q96RF0 628 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 MYD88Q99836 296 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 MAGEB5Q9BZ81 275 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 VPS16Q9H269 839 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 MYH16Q9H6N6 1097 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 ELOVL5Q9NYP7 299 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 HPSEQ9Y251 543 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 CICQ96RK0 1608 aaPredicted RBP5.03□□□□□ -1.6
CLK1-203ENST00000409769 LAMB4A4D0S4 1761 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 HEG1Q9ULI3 1381 aa5.03□□□□□ -1.6
CLK1-203ENST00000409769 C5P01031 1676 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 NHSQ6T4R5 1651 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 ERVV-2B6SEH9 535 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 AGPSO00116 658 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 EXOC5O00471 708 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 PLIN1O60240 522 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 FGAP02671 866 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 CHRM5P08912 532 aaPredicted RBP5.02□□□□□ -1.61
CLK1-203ENST00000409769 TNFSF4P23510 183 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 GABRB3P28472 473 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 RBL1P28749 1068 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 NR4A2P43354 598 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 CYP4F2P78329 520 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 KCNAB1Q14722 419 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 TAF7Q15545 349 aaPredicted RBP5.02□□□□□ -1.61
CLK1-203ENST00000409769 ST3GAL2Q16842 350 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 ARL13BQ3SXY8 428 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 C4orf46Q504U0 113 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 FAM209BQ5JX69 171 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 KLHDC7AQ5VTJ3 777 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 DENND2CQ68D51 928 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 IL31Q6EBC2 164 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 HIBCHQ6NVY1 386 aaPredicted RBP5.02□□□□□ -1.61
CLK1-203ENST00000409769 CHSY1Q86X52 802 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 LIX1LQ8IVB5 337 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 PNLDC1Q8NA58 520 aaKnown RBP5.02□□□□□ -1.61
CLK1-203ENST00000409769 DEPTORQ8TB45 409 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 GJA10Q969M2 543 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 WDYHV1Q96HA8 205 aa5.02□□□□□ -1.61
CLK1-203ENST00000409769 ZBTB45Q96K62 511 aaPredicted RBP5.02□□□□□ -1.61
CLK1-203ENST00000409769 CCDC138Q96M89 665 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms