RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SUN2Q9UH99 717 aa15.31■□□□□ 0.04
CBX3-203ENST00000409747 ASCC3Q8N3C0 2202 aaKnown RBP15.31■□□□□ 0.04
CBX3-203ENST00000409747 CEP295Q9C0D2 2601 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 MAP1BP46821 2468 aaKnown RBP15.3■□□□□ 0.04
CBX3-203ENST00000409747 ASLP04424 464 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 FYNP06241 537 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 SLC6A4P31645 630 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 ST8SIA6P61647 398 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 CDH18Q13634 790 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 PTPRNQ16849 979 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 TTC31Q49AM3 519 aaPredicted RBP15.3■□□□□ 0.04
CBX3-203ENST00000409747 DCAF12L1Q5VU92 463 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 DENND1BQ6P3S1 775 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 GBP6Q6ZN66 633 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 FIBINQ8TAL6 211 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 ZNF606Q8WXB4 792 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 SLC4A5Q9BY07 1137 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 POPDC2Q9HBU9 364 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 STIM2Q9P246 746 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 NAALADL1Q9UQQ1 740 aa15.3■□□□□ 0.04
CBX3-203ENST00000409747 GOLGA6L7A0A1B0GV03 622 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 GTPBP10A4D1E9 387 aaKnown RBP15.29■□□□□ 0.04
CBX3-203ENST00000409747 METTL12A8MUP2 240 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 DNTTP04053 509 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 MAOBP27338 520 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 CD70P32970 193 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 GRIK2Q13002 908 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 NADSYN1Q6IA69 706 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 IL27RAQ6UWB1 636 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 TMEM110Q86TL2 294 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 ZCCHC9Q8N567 271 aaKnown RBP15.29■□□□□ 0.04
CBX3-203ENST00000409747 WFDC5Q8TCV5 224 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 SLC39A13Q96H72 371 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 PRICKLE1Q96MT3 831 aaPredicted RBP15.29■□□□□ 0.04
CBX3-203ENST00000409747 MIR1-1HGQ9H1L0 117 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 APEX2Q9UBZ4 518 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 E5RJQ4 531 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 H0Y626 953 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 BCAT2O15382 392 aaPredicted RBP15.29■□□□□ 0.04
CBX3-203ENST00000409747 TRIM16O95361 564 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 MOCS3O95396 460 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 YWHAZP63104 245 aaKnown RBP15.29■□□□□ 0.04
CBX3-203ENST00000409747 SIM1P81133 766 aaPredicted RBP15.29■□□□□ 0.04
CBX3-203ENST00000409747 SFSWAPQ12872 951 aaKnown RBP15.29■□□□□ 0.04
CBX3-203ENST00000409747 PDCLQ13371 301 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 EXOC3L4Q17RC7 722 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 MS4A13Q5J8X5 152 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 TAC4Q86UU9 113 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 FAM124AQ86V42 546 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 MLKLQ8NB16 471 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 KDM1BQ8NB78 822 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 TTC17Q96AE7 1141 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 CRACR2AQ9BSW2 395 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 ADAM33Q9BZ11 813 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 THAP9Q9H5L6 903 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 PRSS16Q9NQE7 514 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 TJP2Q9UDY2 1190 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 SCML1Q9UN30 329 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 WASF3Q9UPY6 502 aa15.29■□□□□ 0.04
CBX3-203ENST00000409747 FRYQ5TBA9 3013 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 PAPSS1O43252 624 aaPredicted RBP15.28■□□□□ 0.04
CBX3-203ENST00000409747 CER1O95813 267 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 MOCS2O96007 188 aaPredicted RBP15.28■□□□□ 0.04
CBX3-203ENST00000409747 PROS1P07225 676 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 USP8P40818 1118 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 CAMK4Q16566 473 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
CBX3-203ENST00000409747 ZNF776Q68DI1 518 aaPredicted RBP15.28■□□□□ 0.04
CBX3-203ENST00000409747 UNQ6494/PRO21346Q6UXR6 183 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 CARNMT1Q8N4J0 409 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 ZNF366Q8N895 744 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 ADAM32Q8TC27 787 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 BTN2A3PQ96KV6 586 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 NOX5Q96PH1 765 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 BTBD1Q9H0C5 482 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 NUCKS1Q9H1E3 243 aaKnown RBP15.28■□□□□ 0.04
CBX3-203ENST00000409747 SLC12A6Q9UHW9 1150 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 CACNA1EQ15878 2313 aa15.28■□□□□ 0.04
CBX3-203ENST00000409747 RNASEH1O60930 286 aaKnown RBP15.27■□□□□ 0.04
CBX3-203ENST00000409747 GJB3O75712 270 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 LUC7L3O95232 432 aaKnown RBP15.27■□□□□ 0.04
CBX3-203ENST00000409747 GLI1P08151 1106 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 SLC2A3P11169 496 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 CD59P13987 128 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 SNX16P57768 344 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 RPS14P62263 151 aaKnown RBP15.27■□□□□ 0.04
CBX3-203ENST00000409747 RPS24P62847 133 aaKnown RBP15.27■□□□□ 0.04
CBX3-203ENST00000409747 ARHGAP44Q17R89 818 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 SYPL2Q5VXT5 272 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 FAM114A1Q8IWE2 563 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 ATP6V0D2Q8N8Y2 350 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 OR2I1PQ8NGU4 316 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 SNX19Q92543 992 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 LMLNQ96KR4 655 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 SGK2Q9HBY8 427 aa15.27■□□□□ 0.04
CBX3-203ENST00000409747 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.27■□□□□ 0.04
CBX3-203ENST00000409747 EIF2B4Q9UI10 523 aaKnown RBP15.27■□□□□ 0.04
CBX3-203ENST00000409747 USP24Q9UPU5 2620 aa15.27■□□□□ 0.03
CBX3-203ENST00000409747 SPAARA0A1B0GVQ0 90 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms