RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CCDC6Q16204 474 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 FUT11Q495W5 492 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 FAM133BQ5BKY9 247 aaKnown RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 TCP11X2Q5H9J9 407 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 MIIPQ5JXC2 388 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 WDR45BQ5MNZ6 344 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 GJB7Q6PEY0 223 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 C11orf57Q6ZUT1 292 aaPredicted RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 ADIPOR2Q86V24 386 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 WDTC1Q8N5D0 677 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 ATP6V0D2Q8N8Y2 350 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 TTC17Q96AE7 1141 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 SIPA1Q96FS4 1042 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 EDEM2Q9BV94 578 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 NUP58Q9BVL2 599 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 PCED1AQ9H1Q7 454 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 TMEM245Q9H330 911 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 SIX2Q9NPC8 291 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 TMEM9BQ9NQ34 198 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 USP36Q9P275 1121 aaKnown RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 SUSD2Q9UGT4 822 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 CLEC4EQ9ULY5 219 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 SLC6A14Q9UN76 642 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 ABCA7Q8IZY2 2146 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 PLXND1Q9Y4D7 1925 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 MED19A0JLT2 244 aaPredicted RBP15.07■□□□□ 0
NIF3L1-205ENST00000409588 LNP1A1A4G5 178 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 KCNU1A8MYU2 1149 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 MOCS3O95396 460 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 CALCAP01258 141 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 IGLV3-25P01717 112 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 EPHX1P07099 455 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 SERPINF2P08697 491 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 GNSP15586 552 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 ABCB4P21439 1286 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 CCR1P32246 355 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 PTGER3P43115 390 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 ARID5BQ14865 1188 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 DCAF6Q58WW2 860 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 TRIM61Q5EBN2 209 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 MS4A13Q5J8X5 152 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 PPM1JQ5JR12 505 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 KLHDC7AQ5VTJ3 777 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 TTC39BQ5VTQ0 682 aaPredicted RBP15.07■□□□□ 0
NIF3L1-205ENST00000409588 SYPL2Q5VXT5 272 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 TMEM215Q68D42 235 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 RBM43Q6ZSC3 357 aaKnown RBP15.07■□□□□ 0
NIF3L1-205ENST00000409588 CHST9Q7L1S5 443 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 MFN1Q8IWA4 741 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 TMEM35BQ8NCS4 154 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 ZNF397Q8NF99 534 aaPredicted RBP15.07■□□□□ 0
NIF3L1-205ENST00000409588 SLC2A13Q96QE2 648 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 STK33Q9BYT3 514 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 PLCB1Q9NQ66 1216 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 ABCB8Q9NUT2 735 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 KIAA1522Q9P206 1035 aaPredicted RBP15.07■□□□□ 0
NIF3L1-205ENST00000409588 TJP2Q9UDY2 1190 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 CYTH4Q9UIA0 394 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 SCML1Q9UN30 329 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 PAXBP1Q9Y5B6 917 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 RAD54BQ9Y620 910 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 THADAQ6YHU6 1953 aa15.07■□□□□ 0
NIF3L1-205ENST00000409588 F9P00740 461 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 SYPP08247 313 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 ADRB1P08588 477 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 SLC6A4P31645 630 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 NOS2P35228 1153 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 SCNN1AP37088 669 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 ST8SIA6P61647 398 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 IRX4P78413 519 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 SLC6A3Q01959 620 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 GFPT1Q06210 699 aaPredicted RBP15.06■□□□□ 0
NIF3L1-205ENST00000409588 MBLAC2Q68D91 279 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 RFWD3Q6PCD5 774 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 FRMD1Q8N878 549 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 MSANTD4Q8NCY6 345 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 ANKRD20A12PQ8NF67 263 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 OR2T3Q8NH03 318 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 CPXM1Q96SM3 734 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 MKRN2Q9H000 416 aaKnown RBP15.06■□□□□ 0
NIF3L1-205ENST00000409588 PDCL3Q9H2J4 239 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 SYNCQ9H7C4 482 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 ACP6Q9NPH0 428 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 RXFP3Q9NSD7 469 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 WSB2Q9NYS7 404 aaPredicted RBP15.06■□□□□ 0
NIF3L1-205ENST00000409588 CYP8B1Q9UNU6 501 aa15.06■□□□□ 0
NIF3L1-205ENST00000409588 GOLGA6L7A0A1B0GV03 622 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 C4orf47A7E2U8 309 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 PES1O00541 588 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 LSM8O95777 96 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 SRPRAP08240 638 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 UCHL3P15374 230 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 CYP11B1P15538 503 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 CSRP1P21291 193 aaKnown RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 CDH5P33151 784 aaPredicted RBP15.05■□□□□ -0
NIF3L1-205ENST00000409588 TPMTP51580 245 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 SULT2A1Q06520 285 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 KCNMA1Q12791 1236 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 CDH18Q13634 790 aa15.05■□□□□ -0
NIF3L1-205ENST00000409588 DRAP1Q14919 205 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms