RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 CCDC3Q9BQI4 270 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 GJB4Q9NTQ9 266 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 PFDN2Q9UHV9 154 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 SLC26A3P40879 764 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 TNFAIP8L3Q5GJ75 292 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 FNDC5Q8NAU1 212 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 COX4I2Q96KJ9 171 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 KLF6Q99612 283 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-203ENST00000409161 AASDHPPTQ9NRN7 309 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 FAM49BQ9NUQ9 324 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 CCDC88AQ3V6T2 1871 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 CNTRLQ7Z7A1 2325 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 KIF28PB7ZC32 967 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 RGS14O43566 566 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 SMNDC1O75940 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHANK2-203ENST00000409161 PDHBP11177 359 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 BHLHB9Q6PI77 547 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 TRPV3Q8NET8 790 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 MAGEC3Q8TD91 643 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 VCPIP1Q96JH7 1222 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 SHCBP1LQ9BZQ2 653 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 ACTR8Q9H981 624 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 CMTM6Q9NX76 183 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 RAPGEFL1Q9UHV5 662 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 POLR1DQ9Y2S0 133 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 TNPO3Q9Y5L0 923 aaKnown RBP12.41□□□□□ -0.42
SHANK2-203ENST00000409161 CSPG5O95196 566 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 PKN1Q16512 942 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 EIF3MQ7L2H7 374 aaKnown RBP12.41□□□□□ -0.42
SHANK2-203ENST00000409161 EEF1AKMT1Q8WVE0 214 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 TPD52L3Q96J77 140 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 ZNF512BQ96KM6 892 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-203ENST00000409161 BCL2L14Q9BZR8 327 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 MYO5BQ9ULV0 1848 aa12.41□□□□□ -0.42
SHANK2-203ENST00000409161 R3HDM2Q9Y2K5 976 aaKnown RBP12.41□□□□□ -0.42
SHANK2-203ENST00000409161 WBP11Q9Y2W2 641 aaKnown RBP12.41□□□□□ -0.42
SHANK2-203ENST00000409161 CHD1O14646 1710 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 E2F8A0AVK6 867 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 ERN1O75460 977 aaKnown RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 ITGA4P13612 1032 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 PGAM1P18669 254 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 TNFRSF8P28908 595 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 ADSSP30520 456 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 KCNJ1P48048 391 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 OTUD3Q5T2D3 398 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 B3GALT6Q96L58 329 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 KHDRBS3O75525 346 aaKnown RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 GPR15P49685 360 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 TAF6P49848 677 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 STK40Q8N2I9 435 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 BSNDQ8WZ55 320 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 L1RE1Q9UN81 338 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 LOC100506127A0A0U1RQW1 187 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 NMT2O60551 498 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 ATP4AP20648 1035 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 DSG3P32926 999 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 PTSQ03393 145 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 PDIA6Q15084 440 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 CHPFQ8IZ52 775 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 RNF145Q96MT1 663 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 EURLQ9NYK6 297 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 TRPC4Q9UBN4 977 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 MINPP1Q9UNW1 487 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 MYMKA6NI61 221 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 C19orf81C9J6K1 198 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 CYP1A1P04798 512 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 PON1P27169 355 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 CACNB2Q08289 660 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 LDHDQ86WU2 507 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 HERC6Q8IVU3 1022 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 PTCD3Q96EY7 689 aaKnown RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 VMP1Q96GC9 406 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 SMAD5Q99717 465 aaKnown RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 CLTCL1P53675 1640 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 LDOC1O95751 146 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 ETS1P14921 441 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 TNK2Q07912 1038 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 MARK2Q7KZI7 788 aaKnown RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 RPRD1AQ96P16 312 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 LRPAP1P30533 357 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 SPPL2AQ8TCT8 520 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 UBE2E3Q969T4 207 aa12.4□□□□□ -0.42
SHANK2-203ENST00000409161 A1CFQ9NQ94 594 aaKnown RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 CORO1CQ9ULV4 474 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-203ENST00000409161 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.43
SHANK2-203ENST00000409161 Q4G0T1 1027 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 ARMCX6Q7L4S7 300 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 QRFPRQ96P65 431 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 SEPT5Q99719 369 aaPredicted RBP12.4□□□□□ -0.43
SHANK2-203ENST00000409161 ADAM33Q9BZ11 813 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 DCLK3Q9C098 648 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 LIMD1Q9UGP4 676 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 ANAPC2Q9UJX6 822 aa12.4□□□□□ -0.43
SHANK2-203ENST00000409161 ZNF232Q9UNY5 417 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms