RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 CDY1Q9Y6F8 540 aa13.54□□□□□ -0.24
NDEL1-203ENST00000402554 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
NDEL1-203ENST00000402554 CFAP69A5D8W1 941 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 F9P00740 461 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 RPL22P35268 128 aaKnown RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 ARPP19P56211 112 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 SMAD4Q13485 552 aaKnown RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 RNASEH2BQ5TBB1 312 aaKnown RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 BSPRYQ5W0U4 402 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 KCTD16Q68DU8 428 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 TMC5Q6UXY8 1006 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 PYROXD2Q8N2H3 581 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 ADAM32Q8TC27 787 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 EDEM1Q92611 657 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 PGAP3Q96FM1 320 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 COL25A1Q9BXS0 654 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 CENPHQ9H3R5 247 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 SHOC2Q9UQ13 582 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 H3BRJ5 948 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 RFPL2O75678 378 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 SHBGP04278 402 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 GOT1P17174 413 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 PTPRDP23468 1912 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 OR1D2P34982 312 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 NR2C2P49116 596 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 KRT71Q3SY84 523 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 CTXN3Q4LDR2 81 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 ZNF280DQ6N043 979 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 HOOK3Q86VS8 718 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 RELL1Q8IUW5 271 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 CDKL3Q8IVW4 592 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 NTAN1Q96AB6 310 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 FUBP3Q96I24 572 aaKnown RBP eCLIP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 PWWP2AQ96N64 755 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 S1PR5Q9H228 398 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 WDR6Q9NNW5 1121 aaKnown RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 DNAJC17Q9NVM6 304 aaKnown RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 DDIT4Q9NX09 232 aa13.53□□□□□ -0.24
NDEL1-203ENST00000402554 ABI2Q9NYB9 513 aaPredicted RBP13.53□□□□□ -0.24
NDEL1-203ENST00000402554 DENND4AQ7Z401 1863 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 BCLAF3A2AJT9 711 aaKnown RBP13.52□□□□□ -0.25
NDEL1-203ENST00000402554 OR6C75A6NL08 312 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 TNFRSF10BO14763 440 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 AMPD1P23109 780 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 SP100P23497 879 aaPredicted RBP13.52□□□□□ -0.25
NDEL1-203ENST00000402554 ADRA1BP35368 520 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 SLC5A3P53794 718 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 CREMQ03060 361 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 SCAPQ12770 1279 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 XRCC4Q13426 336 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 MRPL58Q14197 206 aaKnown RBP13.52□□□□□ -0.25
NDEL1-203ENST00000402554 ARL13BQ3SXY8 428 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 AGBL2Q5U5Z8 902 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 ANKS3Q6ZW76 656 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 B4GALNT4Q76KP1 1039 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 BEND5Q7L4P6 421 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 CROCCP2Q86T23 111 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 SCN4BQ8IWT1 228 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 PPIL6Q8IXY8 311 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 SCAMP5Q8TAC9 235 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 RNF139Q8WU17 664 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 RBM15Q96T37 977 aaKnown RBP eCLIP13.52□□□□□ -0.25
NDEL1-203ENST00000402554 TMPRSS4Q9NRS4 437 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.52□□□□□ -0.25
NDEL1-203ENST00000402554 FBXW11Q9UKB1 542 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
NDEL1-203ENST00000402554 PCDHB5Q9Y5E4 795 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 PATJQ8NI35 1801 aa13.52□□□□□ -0.25
NDEL1-203ENST00000402554 MUC3AQ02505 3323 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 KCNN4O15554 427 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 TTC4O95801 387 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 ACTN2P35609 894 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 GBE1Q04446 702 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 UBAP2Q5T6F2 1119 aaKnown RBP13.51□□□□□ -0.25
NDEL1-203ENST00000402554 VSTM1Q6UX27 236 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 SH2D3CQ8N5H7 860 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 KREMEN2Q8NCW0 462 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 PRCCQ92733 491 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-203ENST00000402554 RTP4Q96DX8 246 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 UHRF1Q96T88 793 aaPredicted RBP13.51□□□□□ -0.25
NDEL1-203ENST00000402554 TMEM109Q9BVC6 243 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 USP29Q9HBJ7 922 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 ARHGEF4Q9NR80 690 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 DZANK1Q9NVP4 752 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 PSD3Q9NYI0 1048 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 NINJ2Q9NZG7 142 aa13.51□□□□□ -0.25
NDEL1-203ENST00000402554 BCCIPQ9P287 314 aaKnown RBP eCLIP13.51□□□□□ -0.25
NDEL1-203ENST00000402554 WDR27A2RRH5 827 aa13.5□□□□□ -0.25
NDEL1-203ENST00000402554 SMAPO00193 183 aa13.5□□□□□ -0.25
NDEL1-203ENST00000402554 EEF2KO00418 725 aaKnown RBP13.5□□□□□ -0.25
NDEL1-203ENST00000402554 TRIM66O15016 1216 aa13.5□□□□□ -0.25
NDEL1-203ENST00000402554 ACSL3O95573 720 aa13.5□□□□□ -0.25
NDEL1-203ENST00000402554 RBL1P28749 1068 aa13.5□□□□□ -0.25
NDEL1-203ENST00000402554 CXCR3P49682 368 aa13.5□□□□□ -0.25
NDEL1-203ENST00000402554 YWHAGP61981 247 aaKnown RBP eCLIP13.5□□□□□ -0.25
NDEL1-203ENST00000402554 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
NDEL1-203ENST00000402554 SMAD2Q15796 467 aaKnown RBP13.5□□□□□ -0.25
NDEL1-203ENST00000402554 KYNUQ16719 465 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms