RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 FAM160B1Q5W0V3 765 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 CYP2R1Q6VVX0 501 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 ATG14Q6ZNE5 492 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 AMIGO2Q86SJ2 522 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 CDKL3Q8IVW4 592 aaPredicted RBP9.42□□□□□ -0.9
HPS4-203ENST00000402105 TP53INP2Q8IXH6 220 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 FBXW8Q8N3Y1 598 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 OR52K1Q8NGK4 314 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 MIPOL1Q8TD10 442 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 EME1Q96AY2 570 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 RCN3Q96D15 328 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 OMDQ99983 421 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 TRPV6Q9H1D0 765 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 NRDE2Q9H7Z3 1164 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 SYBUQ9NX95 663 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 PCDHGC3Q9UN70 934 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 ZNF711Q9Y462 761 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 BTAF1O14981 1849 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 SPATA31C2B4DYI2 1134 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 GPR25O00155 361 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 TRDMT1O14717 391 aaKnown RBP9.42□□□□□ -0.9
HPS4-203ENST00000402105 PLIN3O60664 434 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 PLA2G6O60733 806 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 VTNP04004 478 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 BACE1P56817 501 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 NADK2Q4G0N4 442 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 CMPK2Q5EBM0 449 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 GJC2Q5T442 439 aaPredicted RBP9.42□□□□□ -0.9
HPS4-203ENST00000402105 MBLAC2Q68D91 279 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 MPZL3Q6UWV2 235 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 MAVSQ7Z434 540 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 USP33Q8TEY7 942 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 KIF12Q96FN5 646 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 NPAS2Q99743 824 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 PLAC1Q9HBJ0 212 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 CPSF3Q9UKF6 684 aaKnown RBP9.42□□□□□ -0.9
HPS4-203ENST00000402105 CNTN6Q9UQ52 1028 aa9.42□□□□□ -0.9
HPS4-203ENST00000402105 LTBP4Q8N2S1 1624 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 IRF6O14896 467 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 TPST1O60507 370 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 IL4RP24394 825 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 ARRB2P32121 409 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 ARL4AP40617 200 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 SERPINB9P50453 376 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 KLF10Q13118 480 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 ANKRD20A4Q4UJ75 823 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 BOLA3Q53S33 107 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 FSCBQ5H9T9 825 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 RARS2Q5T160 578 aaKnown RBP9.41□□□□□ -0.9
HPS4-203ENST00000402105 STYK1Q6J9G0 422 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 MAPK15Q8TD08 544 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 TMEM174Q8WUU8 243 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 TSNARE1Q96NA8 513 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 PDGFDQ9GZP0 370 aaPredicted RBP9.41□□□□□ -0.9
HPS4-203ENST00000402105 TCF7L2Q9NQB0 619 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 SIX4Q9UIU6 781 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 AP4E1Q9UPM8 1137 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 PCDHA11Q9Y5I1 949 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 STYXL1Q9Y6J8 313 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 ADGRA2Q96PE1 1338 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 A0A096LPK6 155 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 A0A1B0GTW7 788 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 C2CD4BA6NLJ0 364 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 KLF11O14901 512 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 LTFP02788 710 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 HNRNPCP07910 306 aaKnown RBP eCLIP9.41□□□□□ -0.9
HPS4-203ENST00000402105 P4HA1P13674 534 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 XRCC1P18887 633 aaPredicted RBP9.41□□□□□ -0.9
HPS4-203ENST00000402105 PTPN7P35236 360 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 FDFT1P37268 417 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 ETFBP38117 255 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 GABRB2P47870 512 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 EFNA5P52803 228 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 AP3M2P53677 418 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 NAGLUP54802 743 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 INHBCP55103 352 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 HDAC4P56524 1084 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 NME5P56597 212 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 PCLAFQ15004 111 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 FAM219BQ5XKK7 198 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 ZNF280CQ8ND82 737 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 DIS3LQ8TF46 1054 aaKnown RBP9.41□□□□□ -0.9
HPS4-203ENST00000402105 KCNK16Q96T55 309 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 CDT1Q9H211 546 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 Q9H521 79 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 IL1RL2Q9HB29 575 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 GTSE1Q9NYZ3 720 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 COPG2Q9UBF2 871 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 EMCNQ9ULC0 261 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 SYNPO2Q9UMS6 1093 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 FAF1Q9UNN5 650 aaPredicted RBP9.41□□□□□ -0.9
HPS4-203ENST00000402105 EFR3BQ9Y2G0 817 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 COMMD3-BMI1R4GMX3 469 aa9.41□□□□□ -0.9
HPS4-203ENST00000402105 A0A087WZ62 844 aa9.4□□□□□ -0.9
HPS4-203ENST00000402105 MAGEB3O15480 346 aa9.4□□□□□ -0.9
HPS4-203ENST00000402105 FOXD2O60548 495 aaPredicted RBP9.4□□□□□ -0.9
HPS4-203ENST00000402105 SUPT3HO75486 399 aa9.4□□□□□ -0.9
HPS4-203ENST00000402105 AOC1P19801 751 aa9.4□□□□□ -0.9
HPS4-203ENST00000402105 PRKCHP24723 683 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms