RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 SLC2A14Q8TDB8 520 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 MTFR1LQ9H019 292 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 ZNF446Q9NWS9 450 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 SH3BP4Q9P0V3 963 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 STARD13Q9Y3M8 1113 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 SPTLC1O15269 473 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 CLPTM1O96005 669 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 CYP1A1P04798 512 aaPredicted RBP18.91■□□□□ 0.62
USP25-204ENST00000400183 MLH1P40692 756 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 FAM171A1Q5VUB5 890 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 RIPOR1Q6ZS17 1223 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 MAP4K3Q8IVH8 894 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 SCUBE3Q8IX30 993 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 SMAD5Q99717 465 aaKnown RBP18.91■□□□□ 0.62
USP25-204ENST00000400183 RERGLQ9H628 205 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 CROTQ9UKG9 612 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 LACTBL1A8MY62 500 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 FAM220BPB1ANY3 271 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 SNUPNO95149 360 aaKnown RBP18.91■□□□□ 0.62
USP25-204ENST00000400183 VAPBO95292 243 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 GHRP10912 638 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 ZNF135P52742 658 aaPredicted RBP18.91■□□□□ 0.62
USP25-204ENST00000400183 PLD1Q13393 1074 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 MFSD10Q14728 455 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 FAM45BPQ6NSW5 357 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 DUSP9Q99956 384 aaKnown RBP18.91■□□□□ 0.62
USP25-204ENST00000400183 RTN3O95197 1032 aaPredicted RBP18.91■□□□□ 0.62
USP25-204ENST00000400183 HMGCRP04035 888 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 SSTR1P30872 391 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 ZNF544Q6NX49 715 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 DPP10Q8N608 796 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 OSCP1Q8WVF1 389 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 ATXN2LQ8WWM7 1075 aaKnown RBP18.91■□□□□ 0.62
USP25-204ENST00000400183 ANKRD6Q9Y2G4 727 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 NDUFAF1Q9Y375 327 aa18.91■□□□□ 0.62
USP25-204ENST00000400183 KCNK1O00180 336 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 AKR1A1P14550 325 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 YBX3P16989 372 aaKnown RBP eCLIP18.9■□□□□ 0.624e-7■■□□□ 14
USP25-204ENST00000400183 HOXB8P17481 243 aaPredicted RBP18.9■□□□□ 0.62
USP25-204ENST00000400183 TAL1P17542 331 aaPredicted RBP18.9■□□□□ 0.62
USP25-204ENST00000400183 EARS2Q5JPH6 523 aaKnown RBP18.9■□□□□ 0.62
USP25-204ENST00000400183 SIKE1Q9BRV8 207 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 TLR10Q9BXR5 811 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 VPS51Q9UID3 782 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 NFASCO94856 1347 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 ACADMP11310 421 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 ITGB6P18564 788 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 PTPN3P26045 913 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 OR56A4Q8NGH8 313 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 NFKBIZQ9BYH8 718 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 ROGDIQ9GZN7 287 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 ARMC7Q9H6L4 198 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 NINJ2Q9NZG7 142 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 CAMSAP1Q5T5Y3 1602 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 MCOLN3Q8TDD5 553 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 DEPDC7Q96QD5 511 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 MID1IP1Q9NPA3 183 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 PDZK1P1A8MUH7 402 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 MIPP30301 263 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 CDH8P55286 799 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 ZCCHC8Q6NZY4 707 aaKnown RBP18.9■□□□□ 0.62
USP25-204ENST00000400183 CDK20Q8IZL9 346 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 CYP4Z2PQ8N1L4 340 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 FNDC5Q8NAU1 212 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 MRPL9Q9BYD2 267 aaKnown RBP18.9■□□□□ 0.62
USP25-204ENST00000400183 SMPD4Q9NXE4 827 aa18.9■□□□□ 0.62
USP25-204ENST00000400183 APOC4-APOC2K7ER74 178 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 FCHO1O14526 889 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 KATNA1O75449 491 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 APOC2P02655 101 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 ALDH9A1P49189 494 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 ERVK-9P63128 1117 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 NAB1Q13506 487 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 KCNT2Q6UVM3 1135 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 TLK2Q86UE8 772 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 MED8Q96G25 268 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 SERAC1Q96JX3 654 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 KLHL20Q9Y2M5 609 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 USP32Q8NFA0 1604 aa18.89■□□□□ 0.62
USP25-204ENST00000400183 FAM47E-STBD1D6RA91 191 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 CLTBP09497 229 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 CDK7P50613 346 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 TRIM71Q2Q1W2 868 aaKnown RBP18.89■□□□□ 0.61
USP25-204ENST00000400183 TRAPPC12Q8WVT3 735 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 BDH2Q9BUT1 245 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 PIF1Q9H611 641 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 OR56A5P0C7T3 313 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 IL5RAQ01344 420 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 METTL6Q8TCB7 284 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 SPPL2AQ8TCT8 520 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 PSMD12O00232 456 aaPredicted RBP18.89■□□□□ 0.61
USP25-204ENST00000400183 TSPAN3O60637 253 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 IGSF6O95976 241 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 FGFR1P11362 822 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 BOP1Q14137 746 aaKnown RBP18.89■□□□□ 0.61
USP25-204ENST00000400183 RRP1BQ14684 758 aaKnown RBP18.89■□□□□ 0.61
USP25-204ENST00000400183 FRMPD1Q5SYB0 1578 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 PGLYRP2Q96PD5 576 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 TBL1YQ9BQ87 522 aa18.89■□□□□ 0.61
USP25-204ENST00000400183 IDI2Q9BXS1 227 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms