RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 ME2P23368 584 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ALDH1A3P47895 512 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SLC25A3Q00325 362 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 MPP3Q13368 585 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 GLRA4Q5JXX5 417 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ARMC4Q5T2S8 1044 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 OTOAQ7RTW8 1153 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ZNF333Q96JL9 665 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 COQ7Q99807 217 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 ADI1Q9BV57 179 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 UBE2OQ9C0C9 1292 aaKnown RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 LRRC40Q9H9A6 602 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 KCNMB3Q9NPA1 279 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 KCNQ5Q9NR82 932 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 UBAP1Q9NZ09 502 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 NCKIPSDQ9NZQ3 722 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 VPS51Q9UID3 782 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 DYRK1BQ9Y463 629 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PCDHA3Q9Y5H8 950 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 TCHHQ07283 1943 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 PTGES3LE9PB15 166 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 MED26O95402 600 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 F9P00740 461 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 CYP3A4P08684 503 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 NCAM1P13591 858 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 POU1F1P28069 291 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SKP1P63208 163 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 IL5RAQ01344 420 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 TMEM62Q0P6H9 643 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 KLHL24Q6TFL4 600 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 B3GNT6Q6ZMB0 384 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 MCOLN2Q8IZK6 566 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 CENPLQ8N0S6 344 aaPredicted RBP9.07□□□□□ -0.96
PTPRM-202ENST00000400053 SEMA4DQ92854 862 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 CEP41Q9BYV8 373 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 USP18Q9UMW8 372 aa9.07□□□□□ -0.96
PTPRM-202ENST00000400053 FAM237BA0A1B0GVD1 139 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 PHGDHO43175 533 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 ZNF862O60290 1169 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 RNASEH1O60930 286 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 ERN1O75460 977 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 KRT6BP04259 564 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 CNTFP26441 200 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 PRKCIP41743 596 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 KRT6CP48668 564 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 NUMBP49757 651 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 RARRES1P49788 294 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 AMPD2Q01433 879 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 ITGADQ13349 1161 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 CSHL1Q14406 222 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 INAQ16352 499 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 FAM131BQ86XD5 332 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 MREGQ8N565 214 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 GLIS3Q8NEA6 775 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 OR6J1Q8NGC5 347 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 ETNPPLQ8TBG4 499 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 FAM172AQ8WUF8 416 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 CEP44Q9C0F1 390 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 NRDE2Q9H7Z3 1164 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 VTA1Q9NP79 307 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 UBP1Q9NZI7 540 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 COPG2Q9UBF2 871 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 VTI1BQ9UEU0 232 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 CORO1CQ9ULV4 474 aaPredicted RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 SPATA2Q9UM82 520 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 DRG1Q9Y295 367 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 M0QYT0 321 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 GJB6O95452 261 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 S100A9P06702 114 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 RBP1P09455 135 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 AMHR2Q16671 573 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 ALFQ53S48 1182 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 CDC73Q6P1J9 531 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 C16orf46Q6P387 395 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 IRF2BP1Q8IU81 584 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 ARHGEF19Q8IW93 802 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 UNC45BQ8IWX7 931 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 IQCKQ8N0W5 287 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 EIF1ADQ8N9N8 165 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 RAET1EQ8TD07 263 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 SYTL5Q8TDW5 730 aaPredicted RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 LRRC39Q96DD0 335 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 PDCD2LQ9BRP1 358 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 CINPQ9BW66 212 aaPredicted RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 KIAA1257Q9ULG3 409 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 SYNPO2Q9UMS6 1093 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 GTF2A1LQ9UNN4 478 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 AAR2Q9Y312 384 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 IPPQ9Y573 584 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 FRMPD4Q14CM0 1322 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 PIPSLA2A3N6 862 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 RNF225M0QZC1 329 aaPredicted RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 GAS2O43903 313 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 MYCP01106 439 aaPredicted RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 VIL1P09327 827 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 PABPC1P11940 636 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 FGFR3P22607 806 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 MTA1Q13330 715 aa9.06□□□□□ -0.96
PTPRM-202ENST00000400053 DDX39BQ13838 428 aaKnown RBP9.06□□□□□ -0.96
PTPRM-202ENST00000400053 TRIQKQ629K1 86 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms