RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 ATP11AP98196 1134 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 DLX2Q07687 328 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 HADHQ16836 314 aaKnown RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CDO1Q16878 200 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 C15orf59Q2T9L4 293 aaPredicted RBP15.43■□□□□ 0.06
CAPN3-207ENST00000397200 ARHGAP15Q53QZ3 475 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CES5AQ6NT32 575 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 ZNF276Q8N554 614 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CCDC89Q8N998 374 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 BBOF1Q8ND07 529 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 SHKBP1Q8TBC3 707 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 CCHCR1Q8TD31 782 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 TCEAL4Q96EI5 215 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 NPY6RQ99463 290 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 TSPYL1Q9H0U9 437 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 ADAM7Q9H2U9 754 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 TRPC7Q9HCX4 862 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 MTMR10Q9NXD2 777 aa15.43■□□□□ 0.06
CAPN3-207ENST00000397200 C2orf78A6NCI8 922 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 M0QYT0 321 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 RNF8O76064 485 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 GJA1P17302 382 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 ATP5C1P36542 298 aaKnown RBP15.42■□□□□ 0.06
CAPN3-207ENST00000397200 LTBRP36941 435 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 EFEMP1Q12805 493 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 CCDC85BQ15834 202 aaPredicted RBP15.42■□□□□ 0.06
CAPN3-207ENST00000397200 SLC5A9Q2M3M2 681 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 PRSS36Q5K4E3 855 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 DENND2CQ68D51 928 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 KCTD16Q68DU8 428 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 MSANTD2Q6P1R3 559 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 TRMT10CQ7L0Y3 403 aaKnown RBP15.42■□□□□ 0.06
CAPN3-207ENST00000397200 HOOK3Q86VS8 718 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 RELL1Q8IUW5 271 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 SLC35B2Q8TB61 432 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 ADAM32Q8TC27 787 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 FAM172AQ8WUF8 416 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 NT5C3BQ969T7 300 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 TLCD1Q96CP7 247 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 CCDC114Q96M63 670 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 TBCBQ99426 244 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 CAPS2Q9BXY5 557 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 SMOC2Q9H3U7 446 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 PRDM4Q9UKN5 801 aa15.42■□□□□ 0.06
CAPN3-207ENST00000397200 MRPS23Q9Y3D9 190 aaKnown RBP15.42■□□□□ 0.06
CAPN3-207ENST00000397200 SYNJ2BP-COX16A0A087WUM0 186 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 LRRD1A4D1F6 860 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 RIPK2O43353 540 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 COCHO43405 550 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 ENDOD1O94919 500 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 TRUB2O95900 331 aaKnown RBP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 TBX18O95935 607 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 OAS1P00973 400 aaKnown RBP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 ITGAVP06756 1048 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 TFE3P19532 575 aaPredicted RBP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 DDX6P26196 483 aaKnown RBP eCLIP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 VCPP55072 806 aaKnown RBP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 PITX1P78337 314 aaPredicted RBP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 NME3Q13232 169 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 SKIV2LQ15477 1246 aaKnown RBP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 TEAD2Q15562 447 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 ATAT1Q5SQI0 421 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 TXNDC8Q6A555 127 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 KLHDC10Q6PID8 442 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 LEKR1Q6ZMV7 388 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 BBS12Q6ZW61 710 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 CYP4V2Q6ZWL3 525 aaPredicted RBP15.41■□□□□ 0.06
CAPN3-207ENST00000397200 STRADAQ7RTN6 431 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 CROCCP2Q86T23 111 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 TAC4Q86UU9 113 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 ALLCQ8N6M5 410 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 MSLNLQ96KJ4 702 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 SERPINB11Q96P15 392 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 FOXP3Q9BZS1 431 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 DDIT4Q9NX09 232 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 MARCH2Q9P0N8 246 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 COX16Q9P0S2 106 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 SFMBT1Q9UHJ3 866 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 DNMT3LQ9UJW3 386 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 DNPEPQ9ULA0 475 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 REV3LO60673 3130 aa15.41■□□□□ 0.06
CAPN3-207ENST00000397200 SZT2Q5T011 3432 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 TRAV19A0A0A6YYK7 116 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 ERICH4A6NGS2 130 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 SRRM3A6NNA2 597 aaPredicted RBP15.4■□□□□ 0.06
CAPN3-207ENST00000397200 MDM4O15151 490 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 MOSPD3O75425 235 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 SHBGP04278 402 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 PFKLP17858 780 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 KDELR1P24390 212 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 MIPP30301 263 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 RDXP35241 583 aaKnown RBP15.4■□□□□ 0.06
CAPN3-207ENST00000397200 IRAK1P51617 712 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 ITGA8P53708 1063 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 DEUP1Q05D60 604 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 BYSLQ13895 437 aaKnown RBP15.4■□□□□ 0.06
CAPN3-207ENST00000397200 GPR158Q5T848 1215 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 SH3PXD2AQ5TCZ1 1133 aa15.4■□□□□ 0.06
CAPN3-207ENST00000397200 OTUD1Q5VV17 481 aaPredicted RBP15.4■□□□□ 0.06
CAPN3-207ENST00000397200 LRRC31Q6UY01 552 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms