RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 AKT3Q9Y243 479 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 SNX9Q9Y5X1 595 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 ALDOAP04075 364 aaKnown RBP15.12■□□□□ 0.01
CCNF-202ENST00000397066 PYGLP06737 847 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 THRAP10827 490 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 ADORA2BP29275 332 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 KLF10Q13118 480 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 PCLAFQ15004 111 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 ZNF669Q96BR6 464 aaPredicted RBP15.12■□□□□ 0.01
CCNF-202ENST00000397066 DCUN1D1Q96GG9 259 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 DNAJC1Q96KC8 554 aaKnown RBP15.12■□□□□ 0.01
CCNF-202ENST00000397066 PRPF18Q99633 342 aaKnown RBP15.12■□□□□ 0.01
CCNF-202ENST00000397066 ZNF670Q9BS34 389 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 CYP3A43Q9HB55 503 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 ATXN10Q9UBB4 475 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 SIX4Q9UIU6 781 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 FIS1Q9Y3D6 152 aa15.12■□□□□ 0.01
CCNF-202ENST00000397066 HMX2A2RU54 273 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 F7P08709 466 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 TPSB2P20231 275 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 HDAC4P56524 1084 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 TPSAB1Q15661 275 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 STRA8Q7Z7C7 330 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 PQLC1Q8N2U9 271 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 TMA16Q96EY4 203 aaKnown RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 CPB2Q96IY4 423 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 ZNF778Q96MU6 729 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 LENG8Q96PV6 779 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 KLHL8Q9P2G9 620 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 LZTS1Q9Y250 596 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 PSAT1Q9Y617 370 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 CCDC78A2IDD5 438 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 ATP9BO43861 1147 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 FARP2O94887 1054 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 PGAM1P18669 254 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 RGS2P41220 211 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 ATXN1P54253 815 aaKnown RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 OAZ1P54368 228 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 SLC6A3Q01959 620 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 TMED1Q13445 227 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 MAP1SQ66K74 1059 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 BNC2Q6ZN30 1099 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 UBR3Q6ZT12 1888 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 SAMD7Q7Z3H4 446 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 ZNF781Q8N8C0 355 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 KYQ8NBH2 561 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 DGCR14Q96DF8 476 aaKnown RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 VPS33BQ9H267 617 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 TLK1Q9UKI8 766 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 SPRP35270 261 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 RPL5P46777 297 aaKnown RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 GTF2A2P52657 109 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 TRIML2Q8N7C3 387 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 CNKSR2Q8WXI2 1034 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 BCO2Q9BYV7 579 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 WDR55Q9H6Y2 383 aaPredicted RBP15.11■□□□□ 0.01
CCNF-202ENST00000397066 RHBDL2Q9NX52 303 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 GGA3Q9NZ52 723 aa15.11■□□□□ 0.01
CCNF-202ENST00000397066 HNRNPRO43390 633 aaKnown RBP15.1■□□□□ 0.01
CCNF-202ENST00000397066 GCATO75600 419 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 PABPC4LP0CB38 370 aaKnown RBP15.1■□□□□ 0.01
CCNF-202ENST00000397066 GP5P40197 560 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 RBP5P82980 135 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 MSLNQ13421 630 aaPredicted RBP15.1■□□□□ 0.01
CCNF-202ENST00000397066 TRNP1Q6NT89 227 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 PMF1Q6P1K2 205 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 ILDR2Q71H61 639 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 HACE1Q8IYU2 909 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 KIF12Q96FN5 646 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 ILKAPQ9H0C8 392 aaPredicted RBP15.1■□□□□ 0.01
CCNF-202ENST00000397066 ADA2Q9NZK5 511 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 USP12O75317 370 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 IL4RP24394 825 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 FAM131BQ86XD5 332 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 EXOC8Q8IYI6 725 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 PCYT2Q99447 389 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 MAGEB5Q9BZ81 275 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 SYBUQ9NX95 663 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 LY75O60449 1722 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 HNRNPDQ14103 355 aaKnown RBP15.1■□□□□ 0.01
CCNF-202ENST00000397066 SLC9B1Q4ZJI4 515 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 DRAXINQ8NBI3 349 aaPredicted RBP15.1■□□□□ 0.01
CCNF-202ENST00000397066 SPATA33Q96N06 139 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 SNX15Q9NRS6 342 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 DPP3Q9NY33 737 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 PSMD13Q9UNM6 376 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 AP4B1Q9Y6B7 739 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 NRXN2Q9P2S2 1712 aa15.1■□□□□ 0.01
CCNF-202ENST00000397066 SF3B1O75533 1304 aaKnown RBP eCLIP15.1■□□□□ 0.012e-10■■■■■ 68.9
CCNF-202ENST00000397066 ARHGAP10A1A4S6 786 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 RNF103O00237 685 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 TNFAIP2Q03169 654 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 LSAMPQ13449 338 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 AMHR2Q16671 573 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 PPP1R26Q5T8A7 1209 aaPredicted RBP15.09■□□□□ 0.01
CCNF-202ENST00000397066 SLC9A4Q6AI14 798 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 TIFABQ6ZNK6 161 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 TSHZ1Q6ZSZ6 1077 aa15.09■□□□□ 0.01
CCNF-202ENST00000397066 TASP1Q9H6P5 420 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms