RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 RFWD3Q6PCD5 774 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 LRRC31Q6UY01 552 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 TPRG1Q6ZUI0 275 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 SUGP1Q8IWZ8 645 aaKnown RBP16.97■□□□□ 0.31
AP1S3-202ENST00000396653 ZNF683Q8IZ20 524 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 LGI2Q8N0V4 545 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 TPCN2Q8NHX9 752 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 DDI1Q8WTU0 396 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 TEKT4Q8WW24 435 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 CHFRQ96EP1 664 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 SNRNP25Q9BV90 132 aaKnown RBP16.97■□□□□ 0.31
AP1S3-202ENST00000396653 COL25A1Q9BXS0 654 aaPredicted RBP16.97■□□□□ 0.31
AP1S3-202ENST00000396653 SLC2A11Q9BYW1 496 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 SIK2Q9H0K1 926 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 TMPRSS4Q9NRS4 437 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 SALL4Q9UJQ4 1053 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 CA14Q9ULX7 337 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 AP4E1Q9UPM8 1137 aa16.97■□□□□ 0.31
AP1S3-202ENST00000396653 TECTAO75443 2155 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 F5P12259 2224 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 A0A1B0GVM2 712 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 KRBA1A5PL33 1030 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 TCAF2A6NFQ2 919 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 E9PAM4 449 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 TNFRSF10AO00220 468 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.31
AP1S3-202ENST00000396653 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
AP1S3-202ENST00000396653 TSPAN3O60637 253 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 IL1R2P27930 398 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 L1CAMP32004 1257 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 OPRD1P41143 372 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 SOX9P48436 509 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 SEMA3BQ13214 749 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 PREPLQ4J6C6 727 aaPredicted RBP16.96■□□□□ 0.31
AP1S3-202ENST00000396653 IER5LQ5T953 404 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 TRIM67Q6ZTA4 783 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 CHST9Q7L1S5 443 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 POLNQ7Z5Q5 900 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 RNF10Q8N5U6 811 aaKnown RBP16.96■□□□□ 0.31
AP1S3-202ENST00000396653 TTC8Q8TAM2 541 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 PPARGC1AQ9UBK2 798 aaKnown RBP16.96■□□□□ 0.31
AP1S3-202ENST00000396653 OR12D3Q9UGF7 316 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 PCSK1NQ9UHG2 260 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 FBXO10Q9UK96 956 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 VANGL2Q9ULK5 521 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 TTC28Q96AY4 2481 aa16.96■□□□□ 0.31
AP1S3-202ENST00000396653 CHD5Q8TDI0 1954 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 SHISA7A6NL88 538 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 DRGXA6NNA5 263 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 BUB1O43683 1085 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 TBL1XO60907 577 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 KRT7P08729 469 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 HOXC13P31276 330 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 GGCXP38435 758 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 SGSHP51688 502 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 RPS24P62847 133 aaKnown RBP16.95■□□□□ 0.3
AP1S3-202ENST00000396653 DPYSL2Q16555 572 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 DAB2IPQ5VWQ8 1189 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 C14orf80Q86SX3 495 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 C12orf40Q86WS4 652 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 SIX5Q8N196 739 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 CD101Q93033 1021 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 MYEOVQ96EZ4 313 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 P2RY11Q96G91 374 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 RPRD1AQ96P16 312 aaPredicted RBP16.95■□□□□ 0.3
AP1S3-202ENST00000396653 EPAS1Q99814 870 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 P2RY13Q9BPV8 354 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 MRPS17Q9Y2R5 130 aaKnown RBP16.95■□□□□ 0.3
AP1S3-202ENST00000396653 PPP2R2CQ9Y2T4 447 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 DUSP10Q9Y6W6 482 aa16.95■□□□□ 0.3
AP1S3-202ENST00000396653 A0A0U1RQJ8 604 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 TULP3O75386 442 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 CLDN11O75508 207 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 LRIG2O94898 1065 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 LUC7L3O95232 432 aaKnown RBP16.94■□□□□ 0.3
AP1S3-202ENST00000396653 TCF4P15884 667 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 CDH4P55283 916 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 TMEM196Q5HYL7 178 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 ARTNQ5T4W7 220 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 LRRC38Q5VT99 294 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 TXNDC11Q6PKC3 985 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 ZNF852Q6ZMS4 543 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 PHTF2Q8N3S3 785 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 ATRIPQ8WXE1 791 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 FAM3CQ92520 227 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 IGSF8Q969P0 613 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 TBC1D31Q96DN5 1066 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 ZYG11BQ9C0D3 744 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 DHX35Q9H5Z1 703 aaKnown RBP16.94■□□□□ 0.3
AP1S3-202ENST00000396653 DNAJC17Q9NVM6 304 aaKnown RBP16.94■□□□□ 0.3
AP1S3-202ENST00000396653 PLK2Q9NYY3 685 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 DEC1Q9P2X7 70 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 TRIM10Q9UDY6 481 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 NEU3Q9UQ49 428 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 SLC27A6Q9Y2P4 619 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 SNX10Q9Y5X0 201 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 ALG6Q9Y672 507 aa16.94■□□□□ 0.3
AP1S3-202ENST00000396653 KANSL1LA0AUZ9 987 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms