RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 MIR1-1HGQ9H1L0 117 aa16.96■□□□□ 0.31
CLTA-203ENST00000396603 GAREM1Q9H706 876 aa16.96■□□□□ 0.31
CLTA-203ENST00000396603 SGK2Q9HBY8 427 aa16.96■□□□□ 0.31
CLTA-203ENST00000396603 TM7SF3Q9NS93 570 aa16.96■□□□□ 0.31
CLTA-203ENST00000396603 SFMBT1Q9UHJ3 866 aa16.96■□□□□ 0.31
CLTA-203ENST00000396603 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLTA-203ENST00000396603 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.96■□□□□ 0.31
CLTA-203ENST00000396603 MUC22E2RYF6 1773 aaPredicted RBP16.96■□□□□ 0.31
CLTA-203ENST00000396603 AKAP13Q12802 2813 aa16.96■□□□□ 0.3
CLTA-203ENST00000396603 ADAMTS9Q9P2N4 1935 aa16.96■□□□□ 0.3
CLTA-203ENST00000396603 TYW5A2RUC4 315 aaKnown RBP16.95■□□□□ 0.3
CLTA-203ENST00000396603 SART1O43290 800 aaKnown RBP16.95■□□□□ 0.3
CLTA-203ENST00000396603 DNTTP04053 509 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 ASLP04424 464 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 FMO5P49326 533 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 PAK1Q13153 545 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 ARID5BQ14865 1188 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 MEA1Q16626 185 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 PTPRNQ16849 979 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 PIK3R6Q5UE93 754 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 USP30Q70CQ3 517 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 PROSER1Q86XN7 944 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 SORCS1Q8WY21 1168 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 EDEM1Q92611 657 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 NT5C1BQ96P26 610 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 TRIM62Q9BVG3 475 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 BTBD1Q9H0C5 482 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 ABCB8Q9NUT2 735 aa16.95■□□□□ 0.3
CLTA-203ENST00000396603 EIF2B4Q9UI10 523 aaKnown RBP16.95■□□□□ 0.3
CLTA-203ENST00000396603 TPX2Q9ULW0 747 aaKnown RBP16.95■□□□□ 0.3
CLTA-203ENST00000396603 DFNA5O60443 496 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 DKK1O94907 266 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 LTFP02788 710 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 POLR2EP19388 210 aaKnown RBP16.94■□□□□ 0.3
CLTA-203ENST00000396603 GCNT1Q02742 428 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 HLA-BQ31612 363 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 CT47A1Q5JQC4 288 aaPredicted RBP16.94■□□□□ 0.3
CLTA-203ENST00000396603 MBLAC2Q68D91 279 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 SMYD5Q6GMV2 418 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 TMEM270Q6UE05 265 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 CCNI2Q6ZMN8 369 aaPredicted RBP16.94■□□□□ 0.3
CLTA-203ENST00000396603 HJURPQ8NCD3 748 aaPredicted RBP16.94■□□□□ 0.3
CLTA-203ENST00000396603 FIBINQ8TAL6 211 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 UBA3Q8TBC4 463 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 NELFBQ8WX92 580 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 NDRG1Q92597 394 aaKnown RBP16.94■□□□□ 0.3
CLTA-203ENST00000396603 CAMK1GQ96NX5 476 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 SERPINB11Q96P15 392 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 PRSS16Q9NQE7 514 aa16.94■□□□□ 0.3
CLTA-203ENST00000396603 PAPSS1O43252 624 aaPredicted RBP16.93■□□□□ 0.3
CLTA-203ENST00000396603 ACSL4O60488 711 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 TSPAN3O60637 253 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 SEMA4FO95754 770 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 HLA-EP13747 358 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 LCP1P13796 627 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 CD27P26842 260 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 ACSL1P33121 698 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 RPL34P49207 117 aaKnown RBP16.93■□□□□ 0.3
CLTA-203ENST00000396603 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
CLTA-203ENST00000396603 RPS14P62263 151 aaKnown RBP16.93■□□□□ 0.3
CLTA-203ENST00000396603 BNC1Q01954 994 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 FAM133BQ5BKY9 247 aaKnown RBP16.93■□□□□ 0.3
CLTA-203ENST00000396603 ZNF776Q68DI1 518 aaPredicted RBP16.93■□□□□ 0.3
CLTA-203ENST00000396603 PMF1Q6P1K2 205 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 IGSF8Q969P0 613 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 TTC17Q96AE7 1141 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 RSPH9Q9H1X1 276 aaPredicted RBP16.93■□□□□ 0.3
CLTA-203ENST00000396603 CTNND2Q9UQB3 1225 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 TLR6Q9Y2C9 796 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 DMXL2Q8TDJ6 3036 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 FREM2Q5SZK8 3169 aa16.93■□□□□ 0.3
CLTA-203ENST00000396603 PPP1R3GB7ZBB8 358 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 MSI1O43347 362 aaKnown RBP16.92■□□□□ 0.3
CLTA-203ENST00000396603 PCDHGA12O60330 932 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 GNA14O95837 355 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 TBX4P57082 545 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 ST8SIA6P61647 398 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 SKOR2Q2VWA4 1001 aaPredicted RBP16.92■□□□□ 0.3
CLTA-203ENST00000396603 SASS6Q6UVJ0 657 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 MFN1Q8IWA4 741 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 CCDC117Q8IWD4 279 aaPredicted RBP16.92■□□□□ 0.3
CLTA-203ENST00000396603 SETD7Q8WTS6 366 aaKnown RBP16.92■□□□□ 0.3
CLTA-203ENST00000396603 STK32AQ8WU08 396 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 CYB5D2Q8WUJ1 264 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 TFAP2BQ92481 460 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 LMLNQ96KR4 655 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 C6orf106Q9H6K1 298 aaPredicted RBP16.92■□□□□ 0.3
CLTA-203ENST00000396603 DKK4Q9UBT3 224 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 RWDD2AQ9UIY3 292 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 NCKAP1Q9Y2A7 1128 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 FNDC3AQ9Y2H6 1198 aaKnown RBP16.92■□□□□ 0.3
CLTA-203ENST00000396603 PCDHB4Q9Y5E5 795 aa16.92■□□□□ 0.3
CLTA-203ENST00000396603 PKD1L2Q7Z442 2459 aa16.91■□□□□ 0.3
CLTA-203ENST00000396603 TRIM49BA6NDI0 452 aa16.91■□□□□ 0.3
CLTA-203ENST00000396603 M0QYV0 167 aa16.91■□□□□ 0.3
CLTA-203ENST00000396603 TBL1XO60907 577 aa16.91■□□□□ 0.3
CLTA-203ENST00000396603 RNASEH1O60930 286 aaKnown RBP16.91■□□□□ 0.3
CLTA-203ENST00000396603 BMP6P22004 513 aa16.91■□□□□ 0.3
CLTA-203ENST00000396603 GRK6P43250 576 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms