RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 DDX50Q9BQ39 737 aaKnown RBP16.15■□□□□ 0.18
HOXA3-202ENST00000396352 IL1RAPL1Q9NZN1 696 aa16.15■□□□□ 0.18
HOXA3-202ENST00000396352 TMEM216Q9P0N5 145 aa16.15■□□□□ 0.18
HOXA3-202ENST00000396352 PDP2Q9P2J9 529 aa16.15■□□□□ 0.18
HOXA3-202ENST00000396352 HACD1B0YJ81 288 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 NAB1Q13506 487 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 CCNIQ14094 377 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 Q3C1V9 767 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 PGM2L1Q6PCE3 622 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 GALNT15Q8N3T1 639 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 C7orf31Q8N865 590 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 NETO2Q8NC67 525 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 PYDC1Q8WXC3 89 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 CDKL2Q92772 493 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 COPG2Q9UBF2 871 aa16.14■□□□□ 0.18
HOXA3-202ENST00000396352 LTBP3Q9NS15 1303 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 SLC25A27O95847 323 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 LGALS2P05162 132 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 RPL34P49207 117 aaKnown RBP16.14■□□□□ 0.17
HOXA3-202ENST00000396352 ARHGAP1Q07960 439 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 HNRNPDQ14103 355 aaKnown RBP16.14■□□□□ 0.17
HOXA3-202ENST00000396352 SMAD1Q15797 465 aaKnown RBP16.14■□□□□ 0.17
HOXA3-202ENST00000396352 GJC2Q5T442 439 aaPredicted RBP16.14■□□□□ 0.17
HOXA3-202ENST00000396352 RSPH3Q86UC2 560 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 HACE1Q8IYU2 909 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 OR6Y1Q8NGX8 325 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 ATP2A3Q93084 1043 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 TUBGCP5Q96RT8 1024 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 SH3GL3Q99963 347 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 SYBUQ9NX95 663 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 ARHGAP42A6NI28 874 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 RNF103O00237 685 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 IRF6O14896 467 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 GRK2P25098 689 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 GRM5P41594 1212 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 HARS2P49590 506 aaKnown RBP16.14■□□□□ 0.17
HOXA3-202ENST00000396352 SNX16P57768 344 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 VWA5B1Q5TIE3 1220 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 DHDDSQ86SQ9 333 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 SLC16A10Q8TF71 515 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 CEP41Q9BYV8 373 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 TUBGCP4Q9UGJ1 667 aa16.14■□□□□ 0.17
HOXA3-202ENST00000396352 A0A0G2JLL6 359 aaPredicted RBP16.13■□□□□ 0.17
HOXA3-202ENST00000396352 CCDC130P13994 396 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 INSCQ1MX18 579 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 CWF19L1Q69YN2 538 aaKnown RBP16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PRRT2Q7Z6L0 340 aaPredicted RBP16.13■□□□□ 0.17
HOXA3-202ENST00000396352 ACTRT2Q8TDY3 377 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 NLRP7Q8WX94 980 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 GPRC5DQ9NZD1 345 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 ZCCHC18P0CG32 403 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 LCP1P13796 627 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 SCNN1AP37088 669 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 ABCE1P61221 599 aaKnown RBP16.13■□□□□ 0.17
HOXA3-202ENST00000396352 TTLL4Q14679 1199 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PDPK2PQ6A1A2 396 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 P2RY11Q96G91 374 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 EBF3Q9H4W6 596 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 ZDHHC7Q9NXF8 308 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 RBPJLQ9UBG7 517 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 FZD10Q9ULW2 581 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 RNASEH1O60930 286 aaKnown RBP16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PDE5AO76074 875 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 ERVK-10P10266 1014 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PSMB4P28070 264 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 ROR2Q01974 943 aaKnown RBP16.13■□□□□ 0.17
HOXA3-202ENST00000396352 BST2Q10589 180 aaKnown RBP16.13■□□□□ 0.17
HOXA3-202ENST00000396352 RASSF3Q86WH2 238 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PDSS2Q86YH6 399 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PPP4R1Q8TF05 950 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PGLYRP2Q96PD5 576 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 SHCBP1LQ9BZQ2 653 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 ZNF358Q9NW07 568 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 CDH22Q9UJ99 828 aa16.13■□□□□ 0.17
HOXA3-202ENST00000396352 PDCD11Q14690 1871 aaKnown RBP16.12■□□□□ 0.17
HOXA3-202ENST00000396352 OPHN1O60890 802 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 MYL4P12829 197 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 ADORA2BP29275 332 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 MAGEA12P43365 314 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 KCTD2Q14681 263 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 OR6B3Q8NGW1 331 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 PPP2R3CQ969Q6 453 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 GJD2Q9UKL4 321 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 ADAMTS6Q9UKP5 1117 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 RALBP11234 206 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 ITGAXP20702 1163 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 BSPRYQ5W0U4 402 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 CES3Q6UWW8 571 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 STRADAQ7RTN6 431 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 UNC93AQ86WB7 457 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 FAM131BQ86XD5 332 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 MFN1Q8IWA4 741 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 PHTF2Q8N3S3 785 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 ANKRD52Q8NB46 1076 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 ZFAND2BQ8WV99 257 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 C18orf25Q96B23 403 aaPredicted RBP16.12■□□□□ 0.17
HOXA3-202ENST00000396352 OXCT2Q9BYC2 517 aaPredicted RBP16.12■□□□□ 0.17
HOXA3-202ENST00000396352 FAM192AQ9GZU8 254 aa16.12■□□□□ 0.17
HOXA3-202ENST00000396352 FAM96AQ9H5X1 160 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms